Dickeya parazeae: Dd586_3411
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Entry
Dd586_3411 CDS
T01138
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ddc
Dickeya parazeae
Pathway
ddc00300
Lysine biosynthesis
ddc00470
D-Amino acid metabolism
ddc01100
Metabolic pathways
ddc01110
Biosynthesis of secondary metabolites
ddc01120
Microbial metabolism in diverse environments
ddc01230
Biosynthesis of amino acids
Module
ddc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dd586_3411
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dd586_3411
Enzymes [BR:
ddc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Dd586_3411
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ACZ78244
UniProt:
D2BVW0
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All DBs
Position
complement(3890702..3891964)
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AA seq
420 aa
AA seq
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MPHDLNDLSYALNAQSLRALPAQFGCPLWAYDAATIVERIGQLRQFDTIRFAQKACSNLH
ILALMRQQGVKVDSVSLGEIERALAAGFEPGTDAHEIVFTADVLDDATLQRVHELAIPVN
AGSIDMLHQLGERSPGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQALEALSR
YHLKLVGIHMHIGSGVDYRHLEQVCEAMVQQVLAVGQDLEAISAGGGLSIPYHHGGERID
TQHYYGLWNQARERIAAHLGHPVALEIEPGRFLVAESGVLVAQVRAVKDMGSRHFVLVDA
GFSDLMRPAMYGSYHHITLLPGDGRDLSQSPRRDTVVAGPLCESGDVFTQQAGGGVETMA
LPSAQVGDYLVFHDTGAYGASMSSNYNSRPLIAEVLFEQGQPRLIRRRQTLDELLALERV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccacacgatctgaatgacctgtcttatgcgttgaacgcgcagagcctgcgtgcgctg
cctgcccaatttggttgcccgttgtgggcctatgacgctgctaccatcgttgagcgcatt
ggtcagttgcgccagttcgataccatccgttttgcgcagaaagcctgctccaacctgcat
attttggcgttgatgcgccagcagggcgtgaaagtggattcggtttcgttgggtgaaatc
gaacgggcactggccgccggttttgagccgggtactgacgcgcatgagattgtgtttacc
gccgatgtgctcgatgacgccacgctgcaacgggtgcatgagctggctattccggtgaac
gccggttccatcgacatgctgcatcaactgggcgagcgttcgccgggtcacccggtgtgg
ctgcgtattaaccccggttttggacatggtcacagccagaagaccaacaccggtggcgaa
aacagtaaacacggcatctggtatgccgatttaccgcaggcgctggaagccttaagccgt
taccacctgaaattggtcggcatccatatgcatattggttccggcgttgattaccggcat
ctggagcaggtttgcgaagcgatggtgcagcaggtgctggccgtggggcaggatctggag
gcaatttctgcgggtggcgggttgtctattccctatcaccacggcggcgagcgcattgat
acccaacactattatggcctgtggaatcaggcgcgggagcggattgccgcacatctgggg
catccggtggcgttggaaatcgaaccggggcgttttctggtggcggagtccggcgtactg
gtggcgcaggtgcgtgcggtgaaggacatgggcagccgtcattttgtgctggtggatgct
ggattcagtgacctgatgcgcccggcaatgtacggcagttaccaccatattaccctgttg
ccgggcgacgggcgtgacctgagccagtcaccgcggcgtgataccgtggtggcaggcccg
ctgtgtgagtctggcgatgtgttcactcagcaggccggtggcggtgtggaaacgatggcg
ttgccatcggcgcaagtgggtgactatctggtgttccatgataccggcgcgtacggtgcg
tcgatgtcttccaactacaacagccgtccgctgatagcggaagtgctgttcgaacagggg
cagccgcgactgattcgccgccgccaaacgctggacgaattgctggcgctggagcgggtg
taa
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