Dickeya parazeae: Dd586_3711
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Entry
Dd586_3711 CDS
T01138
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ddc
Dickeya parazeae
Pathway
ddc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dd586_3711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddc03021
]
Dd586_3711
03400 DNA repair and recombination proteins [BR:
ddc03400
]
Dd586_3711
Enzymes [BR:
ddc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dd586_3711
Transcription machinery [BR:
ddc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dd586_3711
DNA repair and recombination proteins [BR:
ddc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dd586_3711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ACZ78541
UniProt:
D2BXG6
LinkDB
All DBs
Position
complement(4255397..4256386)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASINMRIKVQRGRGYVPASARIHTEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagttagt
tcgacgcacgccaaggtgacccttgagccgttagagcggggcttcggccatactcttggt
aacgcactgcgccgtattctgctttcatccatgcctggttgcgcggtgaccgaggttgag
attgatggtgtactgcacgagtacagcaccaaagaaggcgtacaggaagatatcctggaa
atcctgctcaacctgaaagggctggcggtgagagttcaaggcaaagatgaagttattctt
accctgaataaatctggcattggccctgtgactgcagccgacatcacccatgatggtgat
gtcgaaatcgtcaagccacagcatgtgatctgccatctgaccgatgagaatgcatctatc
aatatgcgtatcaaagttcagcgtggccgtggttatgtgccggcgtctgcccgtattcat
acggaagaagatgagcgcccgatcggtcgtctgttagtcgacgcttgctacagccctgtt
gagcgtatcgcttacaatgttgaagcagcgcgtgttgaacagcgtactgacctggacaag
ctggttatcgaaatggaaaccaatggtacgatcgatcctgaagaggcgatccgccgtgcg
gcaaccattctggctgaacaattggaagctttcgttgacttacgtgatgtacgtcagccg
gaagtgaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctt
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgaattgcttaaaacgcctaacctgggtaaaaaatctctt
actgagatcaaagacgtgctggcttctcgtggtctgtcactgggcatgcgcctggaaaac
tggccaccggcaagcattgctgatgagtaa
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