Dickeya parazeae: Dd586_3788
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Entry
Dd586_3788 CDS
T01138
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ddc
Dickeya parazeae
Pathway
ddc00040
Pentose and glucuronate interconversions
ddc01100
Metabolic pathways
ddc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dd586_3788
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dd586_3788
Enzymes [BR:
ddc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dd586_3788
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ACZ78618
UniProt:
D2BY26
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Position
4319315..4320442
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AA seq
375 aa
AA seq
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MKSLITPITAGLLLALSQPALAATNTGGYAATAGGNVTGAVSKTATSMQDIVDIIAAARL
DANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDPRGVEIKEFTKGITIIGANG
SSANFGIWIKKSSDVVVQNMRIGYVPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGT
PDGDTTFEAAVDIKGASDYVTVSYNYIHGVKKVGLDGSSSSDTGRNITYHHNRYNDVNAR
LPLQRGGLVHAYNNLYTNVTSSGLNVRQNGQALIENNWFENAVNPVTSRYDGKNFGTWVL
KNNNIAKPADFSTYGITWTADTKPYVNADSWTSTGTFPAVSYSYSPVSAQCVKDKLANYA
GVGKNLATLTSAACQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcactcattaccccgattaccgctggactgttactggcactcagccaacccgcg
ctggctgctaccaataccggcggttacgccgcaacagcggggggcaacgtgacgggtgcg
gtcagcaagacggccacatcgatgcaagatatcgtcgatatcatcgcagcagcccgtctg
gatgctaacggcaaaaaggtgaagggcggcgcgtacccactggtcatcacctataccggt
aatgaagactcgctgatcaacgcggcggcagccaatatctgcggccagtggagcaaagac
ccccgtggcgtggaaatcaaggagttcaccaaaggcatcaccatcatcggcgctaacggc
tcatccgctaacttcggtatctggattaagaaatcctctgacgtggtggtgcaaaacatg
cgtatcggctacgtcccgggcggggctaaagatggcgacatgatccgcgtggatgattcg
ccgaacgtctgggttgaccataacgaattattcgccgccaaccatgagtgcgacggtacg
ccagacggggataccacctttgaagccgccgtcgatatcaaaggggcgtcagattacgtc
accgtttcctacaactacatccacggtgtgaaaaaagtggggctggacggttccagcagc
agcgacaccggccgcaacatcacctatcaccataaccgctataacgacgtgaacgcccgc
ctgccgttacaacgcggtggtctggtgcatgcttacaacaacctgtacaccaatgtcacc
agttccggtctcaacgtgcgtcagaacggccaggccttgatcgaaaacaactggttcgaa
aacgcagtgaatccggtgacatcccgttatgacggcaagaatttcggcacctgggtgctg
aaaaacaacaatatcgccaaaccggctgacttctcgacctacggtatcacctggacggca
gacaccaaaccttacgtgaatgcggatagctggacctccaccggtaccttcccggcggtg
agctatagctacagcccggttagcgcgcagtgtgtgaaggacaaactggctaactacgct
ggtgtgggtaaaaacctggccacgctaaccagcgccgcctgtcagtaa
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