Dickeya parazeae: Dd586_3868
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Entry
Dd586_3868 CDS
T01138
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ddc
Dickeya parazeae
Pathway
ddc03420
Nucleotide excision repair
ddc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dd586_3868
03430 Mismatch repair
Dd586_3868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddc03400
]
Dd586_3868
Enzymes [BR:
ddc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dd586_3868
DNA repair and recombination proteins [BR:
ddc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dd586_3868
MMR (mismatch excision repair)
Other MMR factors
Dd586_3868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
ACZ78698
UniProt:
D2BYP1
LinkDB
All DBs
Position
complement(4413371..4415533)
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AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNDKQRDAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLTVENCSPYSIMAV
TFTNKAAAEMRHRIDQLLGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIDSYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRDRFNNILVDEFQDTNRIQYAWIRLLAGDS
AKVMIVGDDDQSIYGWRGAQVENIQHFLRDFNDVTTIRLEQNYRSTANILNAANALIAHN
GDRLGKNLWTDGIEGEPISLYCAFNELDEARFVVNRIKVWQEAGGALSECAILYRSNAQS
RVLEEALLQQSLPYRIYGGMRFFERQEIKDALSYLRLMTNRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQATRALLQEKVLAGRAAAALQRFLELVDALASDTADLPLHVQ
TDRVIRDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQDEDQDLLPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFVVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAESRRLYGKETYHRPSRFIGELPPECVEEVRLRASVSRPVNHQRLG
TPISQSDTGYKLGQRVRHAKFGEGTIVNVEGSGEHCRIQVAFVGQGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgacctgctcgacagtctgaatgataaacagcgtgacgccgtggcggcg
ccgcgcagcaatatgctggtactggctggcgcaggcagtggcaaaacccgcgtactggtg
caccgcatcgcctggttgctgacggtggagaactgctcgccgtattcgatcatggcggtg
acctttaccaacaaggcggcggcggaaatgcgccaccgtatcgatcaactgctcggcacc
agccaggggggaatgtggatcggtactttccacgggctggcacatcgcttactgcgcgcg
caccatctggatgccgggttaccgcaggatttccagattctggacagcgaagatcagctg
cggttgctcaaacggctgattaaggcgctgaatctggacgagaaacaatggccaccccgt
caggcgatgtggtacatcaacggcaaaaaggatgaaggcctacggccacagcatatcgat
agctacggcaatccggtggagcagacctggttgcgcatctatcaggcttatcaggaggcc
tgtgatcgcgccgggttggtggatttcgccgaactgctgctgcgcgcccatgaattgtgg
ctcaacaaaccgcatattcttcagcattatcgcgatcgctttaacaacattctggtggat
gagtttcaggataccaaccgtatccagtatgcctggatccgcttgctggctggcgatagc
gccaaagtgatgatcgtcggtgatgacgaccagtctatctatggctggcgtggggcgcag
gtggagaacattcagcatttcctgcgtgacttcaacgacgtgacgaccatccgtctggag
cagaattaccgttccaccgccaatattcttaacgccgccaacgcgttgattgcccacaac
ggcgatcgactgggtaaaaacctgtggaccgacggtattgaaggcgagccgatttcgctc
tactgcgcctttaacgaactggatgaagcgcggtttgtggtcaaccgtatcaaggtgtgg
caggaagcgggcggtgcgctcagcgaatgcgctattttgtatcgcagcaacgcccaatcc
cgtgtgctggaagaagcgttgttgcagcaaagtctgccgtaccggatttatggcggcatg
cgcttcttcgaacgacaggaaatcaaagacgccttgtcttatctgcgtttgatgactaac
cgcaacgatgacgccgcgtttgaacgcgtggtcaacaccccgacgcgcggtatcggcgat
cgcaccctggacgtggtgcgccagaccgcccgcgaccgtcagttgacgctgtggcaggcc
acgcgtgcgttgctacaggaaaaggtgctggccgggcgtgcggcggcggcattacagcgt
tttctggaactggtggatgcgcttgccagcgatactgctgacttacccttgcatgtgcag
accgaccgggtgattcgcgactccggcttgtggagcatgtacgagcaggaaaaaggcgaa
aaaggtcaggcgagggtagagaacctggaagagctggtgacggcgacccggcaattcagc
tatcaggatgaagatcaggatttgctgccactacaggcgtttttgtctcatgcggcgctg
gaggctggcgaggggcaggcggatgcctatcaggacgcggtgcaattgatgacactgcac
tccgccaaagggctggagttcccacaggtgttcgtcgtcggtatggaagaggggatgttc
cccagccagatgtcgctggatgaaggcggccgtctggaagaagagcgtcggctggcgtat
gtcggcgtgacgcgtgccatgcagaaattgaccctgacttacgctgaaagccgacggcta
tacggtaaggagacgtaccaccgtccgtcacgctttatcggcgagttaccgcctgagtgc
gtggaagaggtgcggctgcgcgccagcgtctcgcgcccggtcaaccatcagcggctgggg
acgccaatcagccagagcgataccggctataagctggggcaacgggtacgccacgccaag
tttggcgaaggcaccattgttaacgtggaaggcagcggcgaacattgccgtatccaggtc
gcctttgtgggtcagggcatcaagtggctggtggctgcctatgcccgtctggaggcggta
tag
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