KEGG   Dickeya parazeae: Dd586_3872
Entry
Dd586_3872        CDS       T01138                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ddc  Dickeya parazeae
Pathway
ddc00300  Lysine biosynthesis
ddc00470  D-Amino acid metabolism
ddc01100  Metabolic pathways
ddc01110  Biosynthesis of secondary metabolites
ddc01120  Microbial metabolism in diverse environments
ddc01230  Biosynthesis of amino acids
Module
ddc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ddc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Dd586_3872
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Dd586_3872
Enzymes [BR:ddc01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     Dd586_3872
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: ACZ78702
UniProt: D2BYP5
LinkDB
Position
complement(4417939..4418763)
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVYFSPDLIRRLSDRHCGVGFDQLLIVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTSKREINVSTHNGRMVLSVTEDELVRVNMGE
PNFEPQQVPFRAAKPEKTYILRAAEHTVLCGVVSMGNPHCVLQVDNVDTAPVEEQGPLLE
NHERFPERANVGFMQVVNPHLIRLRVFERGAGETQACGSGACAAVAVGIQQGLLAADVKV
QLPGGELDIHWDGPGHPLFMTGPATHVYDGFIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctccaaaatgcacggtctgggcaatgatttcatggttgtcgatgccgtgacg
cagaatgtctacttttcaccggatctgatccgtcgcttatcggatcggcattgcggagtg
gggttcgatcaactgttgatcgtcgaaccgccttacgatcctgagctggattttcactat
cgcatcttcaacgccgatggcagtgaagtagcgcagtgcggtaatggcgcacgctgcttt
gcgcgttttgtccgcctgaaagggttgaccagtaaacgtgagatcaacgtcagtacgcat
aacggccgcatggtactgtcggtgacggaagatgaactggtgcgggtcaatatgggcgag
cccaactttgaaccgcaacaggtgccgtttcgggcggctaagccggaaaaaacctatatt
ttgcgcgccgcggaacacacggtgttgtgcggtgtggtgtcgatgggtaacccgcattgc
gtgcttcaggtggataatgtggataccgcgccggtggaggaacaaggcccgttgctggaa
aaccatgagcgttttcctgagcgtgccaatgtcggctttatgcaggtggttaatccccac
cttatccggttgcgtgtctttgagcgcggtgcgggggaaacgcaagcctgcggcagcggt
gcctgcgccgctgtggcggtcggcatccaacaggggctgctggcagcggatgtcaaagtc
caactgcctggtggtgaactggacattcactgggacggccccggtcatccgttgtttatg
accggcccggcaacccatgtttatgatggatttattcatctatga

DBGET integrated database retrieval system