Dickeya parazeae: Dd586_3872
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Entry
Dd586_3872 CDS
T01138
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ddc
Dickeya parazeae
Pathway
ddc00300
Lysine biosynthesis
ddc00470
D-Amino acid metabolism
ddc01100
Metabolic pathways
ddc01110
Biosynthesis of secondary metabolites
ddc01120
Microbial metabolism in diverse environments
ddc01230
Biosynthesis of amino acids
Module
ddc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dd586_3872
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dd586_3872
Enzymes [BR:
ddc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Dd586_3872
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ACZ78702
UniProt:
D2BYP5
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All DBs
Position
complement(4417939..4418763)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPDLIRRLSDRHCGVGFDQLLIVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTSKREINVSTHNGRMVLSVTEDELVRVNMGE
PNFEPQQVPFRAAKPEKTYILRAAEHTVLCGVVSMGNPHCVLQVDNVDTAPVEEQGPLLE
NHERFPERANVGFMQVVNPHLIRLRVFERGAGETQACGSGACAAVAVGIQQGLLAADVKV
QLPGGELDIHWDGPGHPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtctgggcaatgatttcatggttgtcgatgccgtgacg
cagaatgtctacttttcaccggatctgatccgtcgcttatcggatcggcattgcggagtg
gggttcgatcaactgttgatcgtcgaaccgccttacgatcctgagctggattttcactat
cgcatcttcaacgccgatggcagtgaagtagcgcagtgcggtaatggcgcacgctgcttt
gcgcgttttgtccgcctgaaagggttgaccagtaaacgtgagatcaacgtcagtacgcat
aacggccgcatggtactgtcggtgacggaagatgaactggtgcgggtcaatatgggcgag
cccaactttgaaccgcaacaggtgccgtttcgggcggctaagccggaaaaaacctatatt
ttgcgcgccgcggaacacacggtgttgtgcggtgtggtgtcgatgggtaacccgcattgc
gtgcttcaggtggataatgtggataccgcgccggtggaggaacaaggcccgttgctggaa
aaccatgagcgttttcctgagcgtgccaatgtcggctttatgcaggtggttaatccccac
cttatccggttgcgtgtctttgagcgcggtgcgggggaaacgcaagcctgcggcagcggt
gcctgcgccgctgtggcggtcggcatccaacaggggctgctggcagcggatgtcaaagtc
caactgcctggtggtgaactggacattcactgggacggccccggtcatccgttgtttatg
accggcccggcaacccatgtttatgatggatttattcatctatga
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