Dickeya parazeae: Dd586_4129
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Entry
Dd586_4129 CDS
T01138
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
ddc
Dickeya parazeae
Pathway
ddc00860
Porphyrin metabolism
ddc01100
Metabolic pathways
ddc01110
Biosynthesis of secondary metabolites
ddc01240
Biosynthesis of cofactors
Module
ddc_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Dd586_4129
Enzymes [BR:
ddc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
Dd586_4129
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Gene cluster
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Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
ACZ78955
UniProt:
D2C068
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All DBs
Position
complement(4719454..4720827)
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AA seq
457 aa
AA seq
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MSEQTIDWDLSLIQKYNYSGPRYTSYPTALEFSDSYDDAAFTEAVVRYPHRPLSLYLHIP
FCYRLCYFCGCNKLVTRQLHKADEYLDRLALEIHQRAPLFANRTVTQMHWGGGTPTFLNK
AQISRLMSLLRQHFHFSEHAEMSLEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQR
LVNREQDEAFIFALIERAKALGFTSTNIDLIYGLPKQTPDSFAFTLQRVAELRPDRLSVF
NYAHLPSLFAAQRKIKEADLPDAEQKLAILQQTIQSLTAAGYQFIGMDHFARPDDELAVA
QREGKLHRNFQGYTTQGDTDLLGLGVSAISMIGDSYAQNQKELKLYYADVEQRGHALWRG
LSLTRDDCIRRDVIKALICHFQLEFAAIEQAYGLSFGDYFREDLALLAPMAQDGLVEIQA
DGIRVTAKGRLLIRNICMCFDVYFRNKMRERQFSRVI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacagactatcgactgggatttatccctgatccagaaatataactattcgggg
ccgcgctacacttcctaccctaccgcgctggaattcagcgacagctatgacgacgcggcg
tttaccgaggcggtggtccgttatccccaccgcccgttgtcgctgtatctgcatattccg
ttttgttaccgcctgtgctacttctgtggttgcaataagctggtaacccggcagctgcat
aaagccgatgaatatctcgatcggctggcgttggagattcatcaacgcgcaccgttattt
gccaaccgcacggtcacccaaatgcattggggcggcggcacccccacatttctgaataaa
gcacagattagtcggctgatgtcgctgcttcgccagcatttccatttttctgagcacgcc
gagatgtcgctggaagtggatccgcgggaaattgaactggatgtgctcgatcatttgcgc
gctgaaggattcaaccgccttagcatgggcgtgcaggatttcaataaagaggtgcagcgg
ctggttaaccgcgaacaggatgaagcgttcatttttgcgctgattgagcgggccaaggcg
ttagggtttacctcgactaatatcgacctgatttatggtctgcccaaacaaacgccggac
agttttgcgtttactttacagcgggtagccgagttacgcccggatcgtctgagcgtattt
aattatgcccatttgcccagtttgtttgccgcacagcgaaaaattaaagaagcggatctg
ccggatgcggaacaaaaactggccattttgcagcaaaccattcaaagcctgacggcagca
ggttatcagttcatcggcatggatcatttcgcccggccagatgatgagctggcggtagca
cagcgcgagggcaaattgcaccgtaatttccaggggtataccacacaaggcgataccgat
ttactggggttgggcgtgtctgccatcagtatgattggcgacagttatgcacagaaccaa
aaagaattgaagctgtactacgctgatgttgaacaacgagggcatgcattgtggcgtggt
ttgtccctgactcgtgatgattgtattcgccgtgatgtcattaaagcgctgatttgtcat
ttccaactggagtttgcggcgattgagcaggcatatggtctgtcattcggcgattacttc
cgtgaagacctggcgttgctggcaccaatggcacaggatggactggtggagattcaggct
gacggtattcgggtgacggcgaaaggacggctgcttattcgtaatatttgtatgtgtttt
gatgtgtatttccgcaacaaaatgcgtgagcgccaattttcccgagttatttaa
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