Dickeya parazeae: Dd586_4133
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Entry
Dd586_4133 CDS
T01138
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ddc
Dickeya parazeae
Pathway
ddc03030
DNA replication
ddc03410
Base excision repair
ddc03420
Nucleotide excision repair
ddc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dd586_4133
03410 Base excision repair
Dd586_4133
03420 Nucleotide excision repair
Dd586_4133
03440 Homologous recombination
Dd586_4133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddc03032
]
Dd586_4133
03400 DNA repair and recombination proteins [BR:
ddc03400
]
Dd586_4133
Enzymes [BR:
ddc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dd586_4133
DNA replication proteins [BR:
ddc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Dd586_4133
DNA repair and recombination proteins [BR:
ddc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Dd586_4133
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dd586_4133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
ACZ78959
UniProt:
D2C072
LinkDB
All DBs
Position
complement(4722883..4725672)
Genome browser
AA seq
929 aa
AA seq
DB search
MVQIAENPLILVDGSSYLYRAYHAFPPLTNGAGEPTGAMYGVLNMLRSLLQQYHPSHVAV
VFDAKGKTFRDDLFEHYKSHRPPMPDDLRAQIEPLHRMVKAMGLPLLSVSGVEADDVIGT
LAQQAERAGKPVLISTGDKDMAQLVTPQITLINTMNNTILGPDEVCAKYGIPPSLIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGVGGLDALYDNLDKIATLTFRGAKTMAAKLEQHK
DVAYLSYQLATIKTDVELELGCEQLTVNELDVTELRELFARYEFKRWLADVEDGKWLQGG
KKGPAAVPFVKPESEEDAPKEASSVLSQDGYVTILDESSLQDWIARINAAGLFSFDTETD
GLDTLTANLVGISLAIKPGEAAYLPLGHDYLDAPTQLDRDTVLAQLKPLLENEAIGKIGQ
NLKFDKGVMARYGIDLRGIVFDTMLESYVLDSVAGRHDMDSLSERYLQHKTITFEEIAGK
GKNQLTFNQIPLEQAAVYAAEDADVTLRLHETLWAKLEPQQELCQVFKNIDMPLVPVLSR
MERTGVLIDTTILAEHSQELTQRLAELEVRAHELAGEAFNLASPKQLGAILYEKLQLPVI
KKTPKGAPSTNEEVLAELALDHPLPKLILEHRELAKLKSTYTDKLPQMINPLTKRVHTSY
HQAVTATGRLSSSDPNLQNIPVRNEEGRRIRQAFIAPQGYQILAADYSQIELRIMAHLSR
DAGLLKAFSDGLDIHRATAAEVFGLPLDKVTTEQRRSAKAINFGLIYGMSAFGLSRQLGI
ARNEAQKYMNLYFERYPGVQEYMERTRQQAADQGYVSTLDGRRLYLPDIHSRNAMSRKAA
ERAAINAPMQGTAADIIKKAMIAIDDWLQQEKPLATMLMQVHDELVFEVHHSVLDEVSAK
IRNLMEGCMQLDVPLQVDIGTGSNWDQAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaatagcagaaaaccccctcattctggttgacggttcatcgtacctttaccgt
gcttaccacgcctttcctcccttgaccaacggtgctggcgagccaactggagcgatgtac
ggcgtgctcaatatgctgcgtagtttgttgcagcagtatcatcccagccatgtggcggtg
gtgtttgatgcgaaggggaagacatttcgtgatgatttgtttgaacactacaaatctcat
cgtccgccgatgccggatgatctccgcgcgcagattgagccattgcaccgtatggtgaaa
gcgatggggttgccgctgctgtctgtttccggcgttgaggctgacgatgtgattggaaca
ctggcacaacaggcggaacgcgccggtaagcccgtgttgatcagcactggcgataaagat
atggcccaactggtgacgccgcagataaccctgatcaacaccatgaataacactattctg
gggccggatgaggtgtgtgccaaatatggtattcctccctctctgattatcgattttctg
gcgctgatgggggattcctccgacaacattcccggcgtgcctggtgtgggtgaaaaaacc
gcgcaggcgctactgcagggcgtgggggggctggatgcgctctatgacaatctggataag
attgcgacgctgaccttccgtggtgctaaaaccatggcggcgaaactcgagcagcataaa
gacgtggcttacctttcttaccaactggcgacgattaaaaccgatgttgagctggagctc
ggttgcgaacaactgacggtgaatgagctggatgtaacggaattgcgtgagttattcgcc
cgttatgaattcaaacgctggctggcagatgtggaagatggcaaatggttgcagggcggt
aaaaagggtccggctgcggtaccgtttgtgaaaccagaatctgaagaagatgcacctaaa
gaggcgtccagcgtattgtctcaggatggttatgtcaccattctggatgagtcatccttg
caggactggattgccagaattaacgctgctggtctgttttcgtttgataccgaaaccgat
ggccttgatacgctaacggctaatctggtaggtatctctctggctatcaaacccggtgag
gccgcttacctgccattaggccatgattatcttgatgcgccgacacagttggatagagat
accgtgttagcgcaattaaagccactgctggaaaatgaagccatcggtaagatcgggcaa
aacctgaaattcgataaaggcgtgatggcccgttacggcatcgatctgcgcggcattgtg
tttgataccatgctggagtcctacgtgcttgatagtgtggcgggtcgccatgatatggat
agcctgtcagagcgctatctgcagcataagaccattacctttgaagagatcgctggtaag
ggcaagaaccagttaaccttcaatcagatcccacttgagcaggcggcggtttatgccgcg
gaagatgccgacgtgacgttgcgtttgcatgaaacgttatgggcgaagctggagccgcaa
caggagctgtgccaggtattcaagaatatcgatatgccactggtgccagtgttgtcacgt
atggaacgcaccggggtgctgatcgataccacgattctggccgagcattcgcaggaactg
acgcaacgtctggcggagctggaagttcgggcccatgagctggcgggggaggctttcaat
ttggcttcgcctaaacagttaggtgccattctgtacgaaaagctgcagttgccggttatc
aagaaaacgccgaaaggcgcaccttctaccaatgaagaagtgctggctgagctggcgctg
gatcatccgctgccgaagttgattttagaacatcgtgagttggccaaactgaaatcgact
tacacggataagttgccgcagatgatcaacccgttgactaaacgggtgcatacctcctat
caccaggcggtaacggccacggggcgtctgtcctccagtgatcctaacttgcaaaacatt
cctgtgcgtaatgaagaagggcgccgtattcgtcaggcgttcattgccccgcaaggatac
caaattctggcggctgactactcgcagatagagttacgcattatggcgcacctgtcacgg
gatgccggattactgaaggcgttttccgatggactggatattcaccgtgctacagctgcc
gaagtattcggtttaccgcttgataaagtgacgacggaacagcgccgcagtgctaaagcc
atcaactttggcctgatctacgggatgagtgcttttggtttgtctcgccagttgggcatt
gcacgtaatgaagcgcagaagtacatgaatctctattttgagcgctatccaggggtacag
gagtacatggagcgcacacgtcagcaggcggcagatcaagggtatgtctccacgctggat
ggtcgacgcctctacctgccggatattcactcccgtaatgccatgagtcgtaaggccgcg
gagcgtgctgctattaacgcaccgatgcagggaaccgccgcagacatcattaaaaaagcg
atgattgccattgatgactggttgcagcaggaaaagccattggcgacgatgctgatgcag
gtacacgatgaattggtgtttgaagtgcaccattcagtactggatgaagtcagtgcgaag
attcgtaacctgatggaaggctgcatgcagttggatgtgccattacaggtggatatcggt
accggcagtaactgggatcaggcccattaa
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