Dickeya dadantii 3937: Dda3937_00003
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Entry
Dda3937_00003 CDS
T01305
Symbol
ydiJ
Name
(GenBank) predicted FAD-linked oxidoreductase
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd00310
Lysine degradation
ddd01100
Metabolic pathways
ddd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
Dda3937_00003 (ydiJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
Fer4_20
Fer4_17
Fer4_18
Fer4_7
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
ADM98923
UniProt:
E0SGU5
LinkDB
All DBs
Position
complement(2909252..2912311)
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AA seq
1019 aa
AA seq
DB search
MIPQITQAPGIVQPVLSFLEALKQNGFTGDIATQYADRLTMATDNSIYQLLPDAVVFPRS
TADVALLARLADEDRFRELVFTPRGGGTGTNGQALNHGIVVDMSRYMNRILEINPEQGWV
RVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGL
RAVLPGGELLDTQAMPVALAEQLAQEDSPIGRIYHTVLHRCRERRELIVDKFPKLNRFLT
GYDLRHVFSDDMQTFDLTRILTGAEGTLAFITEAKLDITPLPKVRRLVNVKYDSFDSALR
SAPFMVEARALSVETVDSKVLNLAREDIVWHSVSELITDVPGEEMLGLNIVEFAGDDEPL
IDGQVASLCERLDGLLAAREAGVIGYQVCRELAGIERIYGMRKKAVGLLGNSKGQAKPIP
FAEDTCVPPQHLADYIVEFRALLDSHKLSYGMFGHVDAGVLHVRPALDMCDPQQEVLMKQ
LSDQIVALTAKYGGLLWGEHGKGFRAEYSPAFFGPELYEELRRVKAAFDPDNRLNPGKIC
APLGMDAPMMKVDAVKRGTYDRQIPLTVRTAYRGAMECNGNGLCFNFDTRSPMCPSMKIT
GNRIHSPKGRATLVREWLRLLSEQGVDPLALENALPHQRVSFRGLIAKTRNTLAARQGVY
DFSHEVKEAMSGCLACKACSTQCPIKIDVPGFRARFLQLYHTRYLRPARDYLVAGVESYA
PLMAHSPKTFNFFLRQPWVNAVSRKFIGMVDLPLLSAPSLRRQFVGHRVMTTTLEQLEQM
SPQARADHVLIVQDPFTSYYDAQVVADFVRLVEKLGLRPVLLPFSPNGKPQHIKGFLQRF
AKTAGKTAEFLNRVARLGLPMVGVDPALVLCYRDEYREVLGDRRGDFQVQLVHEWLTALL
TSRDDRAAALRDEPWYLFGHCTETTALPVSGQQWSAIFAHFGARLENVSVGCCGMAGTYG
HETRNLAHSQGIYALSWQPSLQRLPQARCLTTGYSCRSQVKRMEGRGLKHPLQALLELV
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgatcccacagatcacacaagcgccgggaatcgttcaaccggtgctgagctttttggaa
gccttgaagcaaaatggttttaccggcgatatcgccacccagtacgccgatcgcctgacg
atggcgacggataacagtatttatcaactgctgccggacgccgtggttttcccccgttct
accgccgacgtggcgctgttggcccggttggcggatgaggatcgctttcgcgagctggtc
ttcacgccgcgcggcggcggcaccggcaccaacgggcaggcgctcaatcacgggattgtg
gtggatatgtcccgctacatgaaccgtattttggaaatcaacccggagcagggttgggta
cgggtggaagccggggtcatcaaggatcaactgaaccagtacctgaagccgttcggctac
ttttttgcgccggagttgtccaccagtaaccgcgccacgctgggcggcatgatcaatacc
gacgcttcggggcagggctcgctggtgtacggcaaaacctcggaccatgtgctggggctg
cgcgcggtgttgccgggcggtgaactgctggatactcaggcgatgccggtggcgctggcg
gaacagctggcgcaggaagattcgccgatcggtcgtatttatcacaccgtattgcatcgc
tgccgtgagcgtcgtgagctgattgtagacaaattccccaaactgaaccgtttcctgacc
ggttacgacctgcgccatgtgttcagcgatgacatgcaaacgtttgacctgacacgcatc
ctgaccggcgccgaggggacgctggcgttcatcaccgaagcgaagctggatatcacgccg
ttgcccaaggtgcgacgactggtcaacgtcaagtacgactcgttcgattccgcgctgcgc
agcgcgccgttcatggtggaagcgcgggcgctgtcggtggaaacggtggactcgaaggtg
ctgaatctggcgcgcgaagatatcgtgtggcactcggtcagcgaactgattaccgatgtg
cccggcgaagagatgctggggctgaacatcgtcgagttcgccggcgacgacgaaccgctg
atcgacggccaggtggcgtcgctgtgtgagcgtctggatgggctgctggcggcccgcgag
gcgggagtgatcggctatcaggtttgccgtgagctggcgggcatcgaacgtatttacggc
atgcgcaagaaagcggtcggcctgctgggcaacagcaaagggcaggcgaaaccgattccg
tttgccgaagacacctgcgtgccgccccagcatctggcggattacatcgtcgagttccgt
gcgctgctggacagccacaagctgagttacggcatgttcggtcatgtggacgccggcgtg
ttgcatgtgcgtccggcgctggatatgtgcgacccgcagcaggaagtgctgatgaagcag
ctgtccgatcagattgtggcgctgaccgccaaatacggcgggttgctgtggggcgaacac
ggcaaaggtttccgcgccgaatacagcccggcgttcttcgggccggaactgtatgaagag
ctgcgccgggtcaaggcggcgttcgacccggataaccgtctcaaccccggcaagatttgt
gcgccgctggggatggacgcgccgatgatgaaggtggatgcggtgaaacgcggcacctac
gatcggcagattccgctgacggtgcgcaccgcataccgcggcgcgatggagtgcaacggc
aacggcctgtgcttcaacttcgatacccgcagcccgatgtgtccgtcgatgaaaatcacc
ggcaaccgtatccattcgcccaaaggccgcgccacgctggtgcgcgagtggctgcgtctg
ctgtcggagcaaggcgtggatccgctggcgttggaaaacgcgctgccgcatcagcgcgtc
agtttccgcgggctgatcgccaaaacccgtaatacgctggccgcgcgtcagggcgtgtat
gacttctcgcatgaggtcaaggaggcgatgtccggctgtctggcctgcaaagcctgctcc
acccagtgcccgatcaagattgatgttcccggttttcgcgcccgcttcctgcagctgtac
cacacccgctatctgcgcccggcgcgggactatctggtggccggcgtggaaagctacgct
ccgctgatggcgcacagcccgaaaaccttcaactttttcctgcgccagccgtgggtcaat
gcggtgagccgcaagttcatcggcatggtggatttaccgttgctgtcggcgccgtcgctg
cgccggcaatttgtcggccaccgggtgatgaccaccacgctggagcagttggaacagatg
tcgccgcaagcgcgcgccgatcatgtgctgatcgtgcaggatccgtttaccagctattac
gacgcgcaggtggtggcggattttgtccggctggtggaaaaactgggattgcggccggtg
ctgctgccgttttcgccgaacggcaagccacaacatatcaaagggttcctgcagcgcttt
gccaaaaccgccggtaaaaccgcggaattcctcaaccgggtggctcgtcttgggctgccg
atggtgggggtggatccggcgctggtgctatgctatcgggatgaataccgggaagtgctg
ggcgatcggcgcggcgattttcaggtgcaactggtgcatgagtggctgacggcgctattg
accagccgcgacgatcgcgctgcggcactgcgcgacgagccgtggtatctgttcggtcac
tgcaccgaaaccacggcgctgccggtcagcgggcaacagtggtcggccattttcgcccat
ttcggcgcccggctggaaaacgttagtgtcggctgttgcggcatggcgggtacctacggt
catgaaacccgcaatctggcgcactctcaggggatctatgctctttcctggcagccgtcc
ctgcaacggttgccgcaggcgcgctgcctgaccaccggctactcctgccgcagtcaggtt
aagcgtatggaagggcgtggattgaaacatccgttgcaggcgttgctggagctggtgtga
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