Dickeya dadantii 3937: Dda3937_00267
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Entry
Dda3937_00267 CDS
T01305
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dda3937_00267 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddd03021
]
Dda3937_00267 (rho)
03019 Messenger RNA biogenesis [BR:
ddd03019
]
Dda3937_00267 (rho)
Transcription machinery [BR:
ddd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Dda3937_00267 (rho)
Messenger RNA biogenesis [BR:
ddd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Dda3937_00267 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ADN00461
UniProt:
E0SKQ8
LinkDB
All DBs
Position
complement(4567084..4568343)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaaaaatacgccagtgtctgagttaattactcttggcgaaaat
atggggctggagaatctggctcgcatgcgtaaacaggatattattttcgctatcctcaag
cagcacgcgaaaagtggtgaagacatctttggcgatggcgtgctggaaatattgcaggat
ggttttggtttcctccgctccgcagacagctcctacctcgccggccctgatgacatctac
gtttctcccagccaaatccgccgcttcaacctccgcactggcgacaccatttccggtaag
attcgtccgccgaaagaaggtgaacgctatttcgcgctgttgaaggttaatgaagtcaac
tacgacaagccggaaaacgcccgcagcaaaatcctgtttgaaaacctgacgccgctgcac
gccaattcacgtctgcgtatggaacgcggcaacggttccaccgaagacctgacggctcgc
gtactggatctggcctcgccgatcggccgcggtcagcgtggcttgatcgtggcgccgccg
aaagccggtaagaccatgctgctgcagaacatcgctcagagcatcgcttacaatcaccct
gactgcgtgctgatggtgctgctgattgacgaacgtccggaagaagtgacggaaatgcag
cgtctggtgaaaggggaagtggtggcgtcgaccttcgacgaaccggcctcccgtcacgtt
caggtcgccgaaatggtgatcgagaaagccaagcgtctggtcgagcacaaaaaagacgta
attatcctgctggactccatcacccgtctggcgcgtgcttacaacaccgtggtgccggcc
tccggcaaggtgctgaccggtggtgtcgacgccaacgccctgcaccgtccgaaacgcttc
ttcggcgcggcccgtaacgttgaagaaggcggcagcctgacgatcatcgccacggccttg
atcgataccggttcgaagatggacgaagtgatttacgaagagttcaaaggtaccggtaac
atggaactgcacctgtctcgtaagattgccgagaagcgcgtgttcccggccatcgactac
aaccgttccggtacccgtaaggaagagctgttgaccacctccgaggaactgcagaaaatg
tggatcctgcgcaagatcatccacccgatgggcgagatcgatgcgatggagttcctgatc
aacaaactggcgatgaccaaaaccaacgacgaattcttcgatatgatgaaacggtcgtaa
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