KEGG   Dickeya dadantii 3937: Dda3937_00297
Entry
Dda3937_00297     CDS       T01305                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ddd  Dickeya dadantii 3937
Pathway
ddd00300  Lysine biosynthesis
ddd00470  D-Amino acid metabolism
ddd01100  Metabolic pathways
ddd01110  Biosynthesis of secondary metabolites
ddd01120  Microbial metabolism in diverse environments
ddd01230  Biosynthesis of amino acids
Module
ddd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ddd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Dda3937_00297 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Dda3937_00297 (dapF)
Enzymes [BR:ddd01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     Dda3937_00297 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: ADN00431
UniProt: E0SKM8
LinkDB
Position
complement(4533207..4534031)
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLSDRHCGVGFDQLLIVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDINVSTHNGRMVLSVTEDELVRVNMGE
PNFEPQQVPFRAAKPEKTYILRAAEHTVLCGAVSMGNPHCVIQVDNVDTAPVETLGPLLE
SHERFPERANVGFMQVVNSGLIRLRVFERGAGETQACGSGACGAVAVGIQQGLLAADVKV
QLPGGELEIHWDGPGHPLFMTGPATHVYDGFMHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctcgaaaatgcacggtctgggcaatgatttcatggttgtcgatgccgtgacg
cagaatgtctacttttcaccggagctgatccgtcgtctgtcggaccggcattgcggggtg
gggttcgatcagttattgatcgttgagccgccctacgatcccgaactggattttcattac
cgaattttcaatgcggacggcagtgaagtggcgcagtgtggcaacggcgctcgctgcttt
gcccgtttcgtacgcctgaaagggttgaccaacaagcgcgatattaatgtcagtacgcat
aacggccgcatggtgttgtcggtgacggaagacgagctggtgcgggtgaacatgggcgaa
cccaacttcgaaccgcagcaggtaccgttccgcgctgccaagccggaaaaaacctatatt
ctgcgcgccgccgagcacacggtgctgtgcggtgcggtgtcgatgggcaacccgcattgt
gtgattcaggtggacaatgtggatactgcgccggtagagacgctcgggccgttgctggaa
agccacgaacgttttccggaacgcgccaacgtcggttttatgcaggtggttaactccggc
ctgatccggttgcgcgtgttcgagcgcggcgcgggcgaaactcaggcctgcggcagcggc
gcctgcggcgcggtggcggtggggattcagcaggggctgctggcggcggatgtcaaagtg
caattgccgggcggcgaacttgagattcactgggacggccccggtcacccgctgtttatg
actggcccggctacgcatgtttatgatgggtttatgcatctatga

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