Dickeya dadantii 3937: Dda3937_00297
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Entry
Dda3937_00297 CDS
T01305
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd00300
Lysine biosynthesis
ddd00470
D-Amino acid metabolism
ddd01100
Metabolic pathways
ddd01110
Biosynthesis of secondary metabolites
ddd01120
Microbial metabolism in diverse environments
ddd01230
Biosynthesis of amino acids
Module
ddd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dda3937_00297 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dda3937_00297 (dapF)
Enzymes [BR:
ddd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Dda3937_00297 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ADN00431
UniProt:
E0SKM8
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Position
complement(4533207..4534031)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLSDRHCGVGFDQLLIVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDINVSTHNGRMVLSVTEDELVRVNMGE
PNFEPQQVPFRAAKPEKTYILRAAEHTVLCGAVSMGNPHCVIQVDNVDTAPVETLGPLLE
SHERFPERANVGFMQVVNSGLIRLRVFERGAGETQACGSGACGAVAVGIQQGLLAADVKV
QLPGGELEIHWDGPGHPLFMTGPATHVYDGFMHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcgaaaatgcacggtctgggcaatgatttcatggttgtcgatgccgtgacg
cagaatgtctacttttcaccggagctgatccgtcgtctgtcggaccggcattgcggggtg
gggttcgatcagttattgatcgttgagccgccctacgatcccgaactggattttcattac
cgaattttcaatgcggacggcagtgaagtggcgcagtgtggcaacggcgctcgctgcttt
gcccgtttcgtacgcctgaaagggttgaccaacaagcgcgatattaatgtcagtacgcat
aacggccgcatggtgttgtcggtgacggaagacgagctggtgcgggtgaacatgggcgaa
cccaacttcgaaccgcagcaggtaccgttccgcgctgccaagccggaaaaaacctatatt
ctgcgcgccgccgagcacacggtgctgtgcggtgcggtgtcgatgggcaacccgcattgt
gtgattcaggtggacaatgtggatactgcgccggtagagacgctcgggccgttgctggaa
agccacgaacgttttccggaacgcgccaacgtcggttttatgcaggtggttaactccggc
ctgatccggttgcgcgtgttcgagcgcggcgcgggcgaaactcaggcctgcggcagcggc
gcctgcggcgcggtggcggtggggattcagcaggggctgctggcggcggatgtcaaagtg
caattgccgggcggcgaacttgagattcactgggacggccccggtcacccgctgtttatg
actggcccggctacgcatgtttatgatgggtttatgcatctatga
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