Dickeya dadantii 3937: Dda3937_00489
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Entry
Dda3937_00489 CDS
T01305
Symbol
yfcX
Name
(GenBank) Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd00071
Fatty acid degradation
ddd00280
Valine, leucine and isoleucine degradation
ddd00310
Lysine degradation
ddd00362
Benzoate degradation
ddd00380
Tryptophan metabolism
ddd00410
beta-Alanine metabolism
ddd00640
Propanoate metabolism
ddd00650
Butanoate metabolism
ddd00907
Pinene, camphor and geraniol degradation
ddd00930
Caprolactam degradation
ddd01100
Metabolic pathways
ddd01110
Biosynthesis of secondary metabolites
ddd01120
Microbial metabolism in diverse environments
ddd01200
Carbon metabolism
ddd01212
Fatty acid metabolism
Module
ddd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Dda3937_00489 (yfcX)
00650 Butanoate metabolism
Dda3937_00489 (yfcX)
09103 Lipid metabolism
00071 Fatty acid degradation
Dda3937_00489 (yfcX)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Dda3937_00489 (yfcX)
00310 Lysine degradation
Dda3937_00489 (yfcX)
00380 Tryptophan metabolism
Dda3937_00489 (yfcX)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Dda3937_00489 (yfcX)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Dda3937_00489 (yfcX)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Dda3937_00489 (yfcX)
00930 Caprolactam degradation
Dda3937_00489 (yfcX)
Enzymes [BR:
ddd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Dda3937_00489 (yfcX)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Dda3937_00489 (yfcX)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Dda3937_00489 (yfcX)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ADM99331
UniProt:
E0SLB9
LinkDB
All DBs
Position
complement(3340952..3343192)
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AA seq
746 aa
AA seq
DB search
MRGGRPGGSDGAGGDAMTELNAIHQAHEHEEHAAFRLTLRPDHIGVITVDVPGEKVNTLK
AEFAEQMRAVLTQARQHSGLQGLVILSGKPASFIAGADIGMLDACSDAAAAQALAETGQE
ALEALAHLPFPVVAAIHGACLGGGLELALACDYRLCTPDDSTRLGLPEVQLGLLPGAGGT
QRLPRLIGVDRALELILTGRQLRAAQARRLGLVDEVVPHAVLLEAALGFIRRGKRLPSSP
GWRHRLLMLPYVRRWLFERVRRQTQAKTQGNYPATARILAVVRRGLEQGSQAGYQAEARA
FGRLVMSPESVALRRLFFTATALKKDQGAPVEPGPLRRVGVLGGGLMGGGIAGVTALNGQ
LPVRIKDIHEQGITHALRNSWQRLSKQVARRRITPAEQRWQMSLISGGTDYRGFERVDVV
VEAVFEEVALKQQMVRETEAVTPPHTVFATNTSSLPIHQIAAGAGRPEQVIGLHYFSPVD
KMPLVEVIPHAGTSEQTLSTTVALAKKQGKTAIVVADKAGFYVNRILAPYLNEAARCLLE
GEPVESVDQALVRFGFPVGPFTLLDEVGIDVAMKIVPVLVAELGERFCAPPALEAIARDN
RKGRKNGRGFYRYDQSRYERLCGLWRRQGNVSDGSLYPLLDVTPKAHLDPALIAQRCVMM
MLNEAVRCLDEGVIRRPGDGDIGAVMGIGFPPFLGGPFHYMNRLGIETVVATLLSLQAQY
GDRFAPAEGLLRRQSQQVDFADETER
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcggcgggcggcctgggggcagcgatggtgctggaggtgacgcaatgaccgaactg
aatgcgatacatcaggcgcacgaacatgaagagcacgcggctttccggttgacgctacgc
cccgatcatatcggcgtgatcaccgtggatgttcccggcgagaaagtgaataccctgaaa
gcggaattcgcggaacagatgcgcgcggtgctgacgcaggctcgacagcacagtggccta
caggggctggttattctctccggcaaaccggcgtcgtttatcgccggggcggatatcggc
atgttggatgcctgttccgacgcggcggcggcgcaggcgctggctgaaaccgggcaggaa
gcgctggaagcgctcgcccacctgccgttcccggtggtggcggctattcacggcgcctgt
ctgggcggcgggctggaactggcgctggcttgcgattatcgcctctgtacgccggacgac
agcacccgcctcgggttgccggaagtgcaattggggctattgccgggcgctggcggcacc
cagcggcttccgcgcctgattggcgtggaccgcgcgctggagttgatcctgaccgggcgg
caactgcgggcggctcaggcgcggcggctcgggttggtggatgaagtggtgccgcacgcc
gtattgctggaggcggcgctgggctttattcgccgcggtaaacggctgccgtcctcgccc
ggctggcggcaccggctactgatgctgccttacgtacgccgctggctgtttgagcgggtg
cggcggcagacgcaggcgaaaactcagggcaattacccggcgacggcgcgtattctggcg
gtggtgcgccggggtctggaacaaggtagccaggcaggctatcaggcggaggcccgcgct
ttcggccgactggtgatgtcgccggagtcggtggcgttgcggcgactgttttttaccgcc
accgcgctgaaaaaagatcagggcgcgccggtcgagcctggtccactgcgccgggttggg
gtgttgggcggcggtttgatgggcggcggcattgccggcgtcaccgcgctgaatggtcaa
ttgccggtaaggatcaaagatattcatgagcaaggcatcacccatgcgctgcgcaacagc
tggcagcggttgagcaaacaggtggcgcgccgccgcatcacgcccgcagagcagcgatgg
cagatgagcctgatttccggcggcaccgattaccggggatttgagcgcgttgatgtggtg
gtggaggcggtattcgaagaggtggcgctcaaacagcagatggtgcgggaaaccgaagcg
gtaacgccgccgcatacggtgtttgccaccaatacctcgtcgctgccgattcatcagatc
gccgccggtgccggtcggcctgagcaggtgataggcctgcactatttcagcccggtggac
aagatgccgctggttgaggttattccccatgccggaaccagcgagcagacgctgtccacc
acggtggcgctggcgaagaagcagggtaaaaccgccatcgtagtggcggataaagctggg
ttttatgttaaccgcattctggcgccttacctgaatgaggcggcccgctgtttgctggaa
ggcgagccggtagaatcggtcgatcaggcgctggtgcgtttcggtttcccggtcgggcct
tttaccttgctggatgaagtggggattgatgtggcgatgaagattgtgccggtgctggtg
gcggagctgggcgagcggttttgcgcgccgccggcgctggaagccattgcccgcgacaac
cgtaaaggccgtaagaacggacgcggcttttatcgctacgatcagtcgcgttatgagcgg
ttatgcggtttgtggcggcgtcagggcaacgtgtccgacggtagtctctatcccttgctg
gatgtgacgcccaaagcgcacctggatccggcgctgattgcgcagcgctgcgtcatgatg
atgctgaatgaagcggtgcgctgtctggatgaaggggtgatccgccgcccgggcgacggc
gacatcggcgcggtaatggggatcgggtttccaccgtttctgggcggcccattccactac
atgaatcgattagggatagaaacagtggtggcaaccctgctgtcgttgcaggcgcagtat
ggcgatcggtttgcgccggcggaaggactgctccggcggcagtcacagcaggttgacttt
gctgatgaaacggaacgctaa
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