Dickeya dadantii 3937: Dda3937_00513
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Entry
Dda3937_00513 CDS
T01305
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dda3937_00513 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddd03019
]
Dda3937_00513 (pcnB)
Enzymes [BR:
ddd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Dda3937_00513 (pcnB)
Messenger RNA biogenesis [BR:
ddd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Dda3937_00513 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ADM99617
UniProt:
E0SBL3
LinkDB
All DBs
Position
3648570..3649973
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AA seq
467 aa
AA seq
DB search
MFTRVANFCRKVLNRENEPARADNPPQAMTVVPRDQHAISRSDISENALKVLYRLSKAGY
EAYLVGGGVRDLLLGKKPKDFDITTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEVIEV
ATFRGHHEQHQEQETKNAAQQGHNGMLLRDNIFGTIEEDAQRRDFSINSLYYSIADFTVR
DYTNGLNDLRQGLIRLIGEPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLASLL
HDIPPARLFEESLKLLQAGYGYPTYQLLCEYQLFQPLFPLISRYFTANGESTMERMIVQV
LKNTDQRIQNDMRVNPAFLFSAMLWYPLVEHAQKLTQESGLAYFEAFALAMNDVLDEQCR
SLAIPKRITSLIRDIWQLQLRLSRRQGKRAFKLMEHPKFRASYDLLCLRAEIENHQELQR
LAQWWGEFQVAAPPRQQVMLNTLDDGPTPHRRSRRPRKRPARRDNAR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atctttacccgggtagctaatttttgccgcaaggtactgaatcgtgagaatgagcccgcc
agagcggacaatccgccgcaggcgatgacggtcgttccccgtgaccagcatgccatttca
cgcagcgacattagtgagaatgcgctgaaagtactgtatcgcctgagcaaagcgggctat
gaggcttatctggtaggcggcggcgtccgcgacctgctgttgggcaaaaaacccaaagac
ttcgatatcaccaccaacgccaccccggaacaggtccgcaagttgttccgcaactgccga
ctggtgggccgccgtttccgtctggcacatgtgatgtttggcccggaagtcatcgaggtc
gccacatttcgcggccaccacgaacagcatcaggaacaggaaacgaaaaatgccgcccag
caaggccacaacggtatgctgctgcgcgacaacattttcggcactatcgaggaagacgcc
cagcggcgcgacttctctatcaacagcctctattacagcatcgccgacttcaccgttcgt
gactataccaacggcctgaacgacctgcgtcaggggttgattcgtctgattggcgaaccg
gaaacccgctaccgcgaagacccggtgcgcatgctgcgcgccgtgcggttcgccgccaaa
ctcggtatgcgcatcagcccggaaaccgccgagccgattccccgtctggcctcgctgctg
cacgacatcccgccggcgcggctgtttgaagaatcgctgaaactgctgcaggcgggttac
ggctatccgacctatcagttgctgtgcgaataccagctgtttcagccgctgtttccgctg
atcagccgctacttcactgctaacggcgaaagcacgatggaacgaatgatcgtgcaggtg
ctgaaaaacaccgatcaacgcatccagaacgacatgcgcgttaatccggcgtttctgttc
tccgccatgctgtggtacccgctggtggaacatgcccagaagctgacgcaggagagcggg
ctggcttacttcgaggcgtttgccttagccatgaacgacgtgctggacgaacagtgtcgc
tcgctggcgatccccaaacgcattacctcgctgatccgcgatatctggcaattgcagttg
cgcctgtctcgccgtcagggcaaacgcgcctttaaactgatggaacacccgaaattccgc
gcctcttatgacctgctctgcctgcgtgccgaaatcgaaaaccatcaggaactacagcgc
ctggcgcagtggtggggagagtttcaggtcgccgcgccgccgcgccagcaggtaatgctg
aacacgctggatgacggcccgacgccgcatcgccgttcacgtcgcccgcgcaagcgccct
gcccgccgggataacgcccggtga
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