Dickeya dadantii 3937: Dda3937_00870
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Entry
Dda3937_00870 CDS
T01305
Symbol
ygdH
Name
(GenBank) conserved protein
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd00230
Purine metabolism
ddd00240
Pyrimidine metabolism
ddd01100
Metabolic pathways
ddd01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Dda3937_00870 (ygdH)
00240 Pyrimidine metabolism
Dda3937_00870 (ygdH)
Enzymes [BR:
ddd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
Dda3937_00870 (ygdH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
Glycos_transf_2
Motif
Other DBs
NCBI-ProteinID:
ADM97270
UniProt:
E0SCC0
LinkDB
All DBs
Position
complement(1132179..1133543)
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AA seq
454 aa
AA seq
DB search
MITHISPLGSMDLLSQLEVDMLKSTASSDLYRLFRNCSLAVLNSGSQTDNSKELLSRYED
FDINVLRRERGVKLELVNPPEDAFVDGQIIRSLQANLFAVLRDILFVNGQIASAGRYQNL
DLEDSTHITNLVFSILRNARALHVGEEPNLVVCWGGHSINETEYLYARKVGSQLGLRELN
ICTGCGPGAMEAPMKGAAVGHAQQRYRDGRFIGMTEPSIIAAEPPNPLVNELIIMPDIEK
RLEAFVRIGHGIIIFPGGVGTAEEFLYLLGIMMDPDNSEQVLPIILTGPQESADYFRVLD
EFIVSTLGRQARRYYSIIINDAAEVARQMKKTMPQVKEHRRHTGDAYSFNWSLRIAPDLQ
LPFEPTHENMANLNLHPDQPAEQLAATLRRAFSGIVAGNVKEAGIRAIEEHGPYKLHGNA
DIMKSMDQLLQDFVSQQRMKLPGSAYVPCYEISS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatcacacatatcagcccgctagggtccatggatttactgtcgcagttggaagtggat
atgctgaaaagcacggccagcagcgatctttaccggctattccgcaattgttccctcgcc
gtcctgaactccggcagtcagacggacaacagcaaggagttgctctcccgttacgaggat
ttcgacatcaacgtgctacgccgtgagcgcggcgtgaagctggaactggtcaacccgccg
gaagacgcatttgtcgacgggcaaattatccgttcgctgcaggccaacctgttcgccgtg
ctgcgagatattctgtttgtgaacgggcagatcgccagcgccggccgttatcaaaatctg
gatctcgaagattccacccacatcactaatctggtgttctccatcctgcgcaacgccaga
gcgctgcatgtcggcgaggagccgaatctggtggtgtgctggggcggtcattcgatcaat
gaaaccgaatacctgtacgcccgcaaagtcggcagccagctcggcttacgcgagctgaac
atctgtaccggttgcggaccgggcgcgatggaagccccgatgaaaggcgccgccgtaggc
catgcccagcagcgttaccgggacgggcgcttcatcggcatgaccgagccgtccatcatc
gccgccgagccgcccaatccgctggtgaatgaactgattatcatgccggatattgaaaaa
cgactggaagcgtttgtgcgcatcggtcacggcatcattattttccctggcggggtcggc
actgcggaagaattcctctatttgctgggcatcatgatggacccggacaacagcgagcag
gtgttgccgattattctcaccggcccgcaggaaagcgccgactacttccgggtgctcgac
gaattcatcgtcagtacgctgggccgtcaggcacgccgttattattccatcatcatcaac
gacgccgccgaagtggctcgccagatgaaaaaaaccatgccacaggtgaaagagcatcgc
cgccatactggcgacgcttacagcttcaactggtcgctgcgcatcgcgccggacttgcaa
ctgccgttcgaaccgacgcacgagaacatggcgaacctcaacctgcatcccgaccagccg
gccgaacagttggctgcgacgttgcgtcgggcgttttccggtatcgtagcaggtaacgtc
aaagaggcgggcattcgggccatcgaagagcacggcccttacaaactgcacggtaatgcc
gacatcatgaagagcatggaccaactgttgcaggacttcgtgtcccagcagcgtatgaag
ctgcccggcagcgcttacgttccgtgctacgaaatcagttcctga
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