Dickeya dadantii 3937: Dda3937_01346
Help
Entry
Dda3937_01346 CDS
T01305
Name
(GenBank) periplasmic binding protein of an ABC transporter
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dda3937_01346
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddd02000
]
Dda3937_01346
Transporters [BR:
ddd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Dda3937_01346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADM96671
UniProt:
E0SJ36
LinkDB
All DBs
Position
492891..494423
Genome browser
AA seq
510 aa
AA seq
DB search
MTHQLARQIYQYLLMALLLGGTTYSYAGKQNDTLVYASDSEVENVSPYHNNMREGVILAH
LAWDTLIYRDPKTGEYKGELATDWKWESPVVLLLHLRKGVTFHNGDSFSADDVVYTFQSI
AGPNTASVIPQSVDWIDHAEKVDDYTVRLHLKKPFPAALEYLSGPTPIYPAKYFQQVKLE
GFSKAPVGTGPYKIVKVTPGQGVSMVKNPDYFKDSPIGQPKIGKLQFVVIRDPEARVAQL
MTGQVDWIWRVASDQVDSLSAMPNIAVKSGETMRVGFLELNTNASGPEGAPFKDLRVRQA
INYAINRQAMVDNLVRGGSKPVYSACFRTQTACDASQVIQYPYDPAKAKQLLAEAGYANG
FDTDLWAYRERDYAEAIIGDLRKVGIRARLHFVQYPVMASALASGQAPLAFSTWGSFSIN
DATAFVTPYFGGKGSDIWKDPQVIAELAKADEVVEPQQRAALYAALLGRISAQAYMAPLF
SYSTHYAFTSDLNFQDWPDELPRFAEASWK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgactcatcaactggcaaggcaaatttatcaatatctattaatggcattgttattaggc
ggtacgacttatagttatgccggcaaacaaaatgacacgctggtttatgcctccgacagt
gaggtggaaaacgtcagtccataccacaataatatgcgcgaaggggtgattctggcgcat
ctcgcctgggatacgctgatatatcgcgatccgaaaaccggagaatataaaggcgaactg
gcgaccgactggaaatgggaatcgccggtggtattgctgctgcacctgcgtaaaggcgtg
actttccataatggcgatagctttagcgccgatgacgtggtgtatacctttcagagcatc
gccgggccgaataccgcctcggtgatcccgcaaagcgtggactggatcgaccatgcggag
aaggtcgatgactacaccgtgcgcctgcacctgaaaaaaccgttcccggcggcgctggaa
tacctctccggcccgacgccaatctaccccgctaaatatttccagcaggtgaagctggag
ggcttcagcaaagcgcctgtcggcaccggcccgtacaaaatcgtcaaagtgacgccgggg
caaggggtgtcgatggtgaaaaacccggactatttcaaagacagcccgatcggacaaccg
aaaatcggcaaactgcagtttgtggtgatccgcgacccggaagcgcgcgtggctcaactg
atgaccggccaggtggactggatctggcgcgtggcgtcggatcaggtggactcgttgtcc
gccatgccgaacatcgcggtgaaaagcggtgaaaccatgcgcgtcggctttctggagctg
aacaccaacgccagcgggccggagggcgcgccgttcaaggatctgcgcgtgcgtcaggcc
atcaattacgccatcaaccgtcaggcgatggtggacaatctggtgcgcggcggcagtaaa
ccggtgtattccgcctgcttccgcacccagactgcctgcgacgccagccaggtgattcag
tacccctacgacccggccaaagccaaacagttgctggcggaagcggggtacgccaacggc
ttcgacaccgacttgtgggcctatcgcgagcgcgattacgccgaagccatcatcggcgat
ctgcgcaaagtcggcatccgcgcccgcctgcacttcgtgcaatacccggtgatggccagc
gcgttggcgtctggtcaggcgccgctggcgtttagcacctggggctcgttttccatcaat
gacgccaccgcgttcgttaccccttatttcggcggtaaaggcagcgatatctggaaagat
ccgcaggtgatcgccgagctggcgaaagcggacgaggtggtggaaccgcagcagcgcgcc
gcgctgtacgccgcactgctgggtcgcatttcggcgcaggcgtatatggcgccgctgttc
tcctattccacccattacgcctttacgtccgacctgaacttccaggactggccggatgaa
ctgccgcgcttcgccgaggcgagctggaagtaa
DBGET
integrated database retrieval system
