Dickeya dadantii 3937: Dda3937_01848
Help
Entry
Dda3937_01848 CDS
T01305
Symbol
nirB
Name
(GenBank) Nitrite reductase [NAD(P)H] large subunit
KO
K00361
nitrite reductase [NAD(P)H] [EC:
1.7.1.4
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd00910
Nitrogen metabolism
ddd01100
Metabolic pathways
ddd01120
Microbial metabolism in diverse environments
Module
ddd_M00531
Assimilatory nitrate reduction, nitrate => ammonia
ddd_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Dda3937_01848 (nirB)
Enzymes [BR:
ddd01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
Dda3937_01848 (nirB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox
Rieske_2
Rubredoxin_C
NIR_SIR
Fer2_BFD
NIR_SIR_ferr
Pyr_redox_3
NAD_binding_8
DAO
AlaDh_PNT_C
GIDA
FAD_binding_3
NAD_binding_7
3HCDH_N
FAD_binding_2
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
ADM99218
UniProt:
E0SKC9
LinkDB
All DBs
Position
complement(3219708..3223883)
Genome browser
AA seq
1391 aa
AA seq
DB search
MSAHLVIIGNGLSSVRLVKRLGQLAPQRYRVTVIDREPRDSYNRVLLSSVLGGEKSFEDT
QLEPAPETMDVTTLTGESVLRIDRSAREVITDRRRLAYDQLVFATGSRPFMPPLPGIDLP
GVMGFRTLDDVERMWAAVRQEKPVVVIGGGLLGIEAAAALRLQGATVTLLHRHARLMERQ
LDATASDLLCTRLHERGIRCLTGVQIQALSGNELSGNELSGGKQVEAVELADGTRLPAGL
VVVATGVQPVCELARDSGLACGRGILADGQLRTADEYVSAVGECAEVKGETVGLVAPCLA
QADVLAARLAEQPVADYAPAALATRLKVTGIDVVSAGELHPQEGDRLHSLSDPLGGHYRR
LIFRDDRLCGALLFGHVSDSPQLLAAMETRLSSAPSSLLFGLSFPEVDIRPAAVRISVMS
KPVLVVVGHGMVGHHFLEQLVERNLHQQYHVVVFGEERHPAYDRVHLSEYFAGRSAESLS
MVSEGFFEQTGIELRTGCQVMTIDRQRRCVRDANGQETPYDRLVLATGSYAFVPPIKGND
RPGCLVYRTLDNLDAIADQARESRSGVVVGGGLLGLEAANALRQLGLETHVVEFAPRLMA
VQLDDGGAQLLRRKIEALNLHVHTSKETVAITAGEQARHRMNFADGTSLETDLILFSAGI
RPRVRLASEAGLEIGVRGGIVIDDHCQTSDDAIFAIGECAVWQGQIFGLVAPGYQMARTV
AARLAQQEQTFIGADMSTKLKLLGVDVASIGDAHGKTEGSLSYQWNDEPNQVYKKIIVSA
DGKRLLGAVLVGDSSDYSTLLQMKLNDMTLPAHPESLILPALDGAAPKGLGVAALPDSAQ
ICSCHNVSKADICAAVDNGCTDLASLKACTKAGTGCGGCVPLLKQVMEYQLQQSGIEVKK
DICEHFAYSRQELYHLIRVNRIRSFDELIARHGHGLGCEICKPLAGSMLASCWNDYVLKP
EHVPLQDTNDRFLANIQKDGTYSVVPRIPGGEITPQGLIAIGQVAERYHLYTKITGGQRV
DLFGARLEQLPAIWQELIDAGFETGHAYGKSLRTVKSCVGSTWCRYGVQDSTTLAIALEH
RYKGLRSPHKLKMAVSGCTRECAEAQGKDIGVIATDKGWNLYVCGNGGMKPRHADLLASD
LDTDTLFRLIDRLLMFYIRTGDRLQRTSVWLDNLEGGIDYLRQVVIDDSLGIAEELENEM
RHVIDSYQCEWQTTLAHDENRALFRAFLNSDTPDEAVVMVPERGQPRPARLEEKTPTTAS
DAPGAEGWQCVGFLSDIPANAGMAARVGHQQVALFHLPAAQPGQAGHVFALDNQEPGSGA
NVLSRGIVGDVAGEPVVISPLYKKRLRLRDGVSPDDSELRVRAWPVRVVQDRIWVANEPM
AVVAADMAEAL
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcatctggtgattatcggcaacggtctgtccagcgtccggctggtgaagcga
ctggggcaactggcaccgcaacgctaccgcgtcaccgtcatcgatcgcgagccgcgcgac
agctataaccgcgtgctgctttcgtcggtgctggggggagagaaaagctttgaggacacg
cagctagaaccggcgccggaaaccatggacgtgaccaccctgaccggcgagtcggtattg
cgtatcgacagatccgcgcgggaagtgatcaccgatcgccgtcgtctggcgtatgaccaa
ctggtgttcgccaccggttcccgcccgtttatgccgccgctgccgggcatcgacctgccg
ggcgtgatgggctttcgtacgctggatgacgttgagcggatgtgggcggcggtgcggcag
gaaaagccggtggtggtgatcggcggcggattactgggcattgaagccgccgccgcgctg
cgcctgcaaggcgccacggtgacgctactgcaccgccacgcccggctgatggagcgtcag
cttgacgccaccgccagcgacctgctgtgcacccggctgcatgagcgcggtatccgttgc
ctgaccggcgtgcagattcaggcattatccggtaacgaattgtccggtaatgaattgtcc
ggcggcaagcaggtggaggcggtcgaactggctgacggcacgcgcctgcccgccggtctg
gtggtggtggcgaccggcgtacaaccggtatgtgagctggctcgcgacagcggcctggcg
tgcgggcgcggcattctggcggacggccagttgcgcaccgccgatgaatacgtcagcgca
gtcggcgagtgcgctgaagtgaagggtgaaacggtcgggctggtagctccctgtctggcg
caggccgacgtgctggccgcccggctggcggagcagccggtggcggattacgcgccggcg
gcgctggccacccgactaaaagttaccgggattgacgtggtgagcgcgggggagttgcac
ccgcaggagggcgatcggctccactcgctgtcagacccgctcggcggccattatcgccgc
ctgatattccgcgacgaccggttatgcggcgcgctgttgttcggtcatgtcagcgacagt
ccgcaactgctggcggccatggagaccaggctgtcatcggcaccgtcgtcgcttttgttt
ggtctttcttttcctgaagtagacatacggcctgcggccgtaaggatttctgtcatgagt
aaacccgtattggtggtagtggggcacggcatggtcgggcaccactttctggagcaactg
gtggaacgcaacctgcaccaacagtatcacgtggtggtgtttggtgaggagcgccatccg
gcctatgaccgggtacatttgtccgagtattttgccggtcgcagcgccgaatcgctgtcg
atggttagtgaaggttttttcgagcagaccggtattgagctgcgtaccggttgtcaggtg
atgacaatcgatcgccagcgccgctgtgtgcgcgacgcgaatggtcaggaaacaccttac
gatcgcctggtgcttgcaaccggctcctatgcgtttgtaccaccgatcaaaggcaatgat
cgccccggctgtctggtatatcgcacgttggataatctggatgcgattgccgaccaggcg
cgcgaatcgcgcagcggcgtggtggtcggcggcggtctgctggggctggaggcggccaat
gcgctgcgccaactggggctggagactcatgtggtagagttcgcaccccggttgatggcg
gtgcaactggatgatggcggcgcacagttgctccggcgcaaaatcgaagcgttgaacctg
catgtgcacaccagcaaagaaacggtcgccattacggcaggcgagcaggcgcgtcaccgc
atgaacttcgccgatggcacgtcgctggaaaccgatctgatactgttttccgccggtatt
cgcccacgcgttcggttggcgagtgaggccgggctggagataggcgtgcgcggcggtatc
gtgattgacgatcattgccagacctcggatgacgctatcttcgccatcggcgagtgtgcg
gtatggcaagggcagatatttgggctggtggcgccgggctaccagatggcgcgcaccgtc
gccgcccggctggcgcagcaggagcaaacgttcatcggggccgacatgagcaccaaactc
aagctgttaggggtggatgtggcctcgatcggcgatgcccacggtaaaaccgagggtagc
ctgagctatcagtggaacgacgaaccgaatcaggtctataaaaaaatcattgtgtcggcg
gacggcaaacggctgctgggagcggtgctggtgggcgacagcagcgattacagcacgctg
ttgcagatgaagctcaacgacatgaccttgcctgcgcacccggaaagcctgattctgccc
gcgctggacggcgcggcgccgaaagggctgggggtggcggcgttgccggacagcgcgcag
atctgctcctgccacaacgtcagcaaagcggatatctgtgcggcggtggacaacggctgc
actgatttggcgtcgctcaaagcttgtactaaagcgggcaccggctgcggcggctgcgta
ccgctgctcaagcaggtgatggagtaccagttgcagcagtcgggcatcgaggtaaaaaaa
gacatttgcgaacatttcgcctattcgcgccaggagctgtaccacctgatccgcgtcaac
cgcatccgcagttttgacgaactgatcgcccgccacggtcatgggctgggttgtgaaatc
tgtaaaccgctggccgggtcgatgctggcgtcctgctggaacgactatgtactgaagccc
gaacacgtaccgttgcaggataccaacgaccgtttcctggccaatatccagaaagacggc
acttactcggtggtgccgcgtattcccggcggcgagatcaccccgcaggggctgatcgcc
atcggccaggtggccgaacgctaccacctgtacaccaaaattaccggcggccagcgggtc
gatctgttcggcgcgcggctggagcagttgccggctatctggcaggagctgatcgacgcc
gggtttgaaaccggtcacgcctacggcaagtcgctgcgtaccgtcaaatcgtgcgtcggc
tccacctggtgccgctacggcgtgcaggattccaccacgctggcgattgcgctggagcac
cgttacaaagggctgcgctcgccgcacaaactcaaaatggcggtctccggctgtacccgc
gaatgcgccgaagcgcagggcaaagacatcggggttatcgccaccgacaagggctggaac
ctgtatgtgtgcggcaatggcggcatgaaaccacgccatgccgacctgctcgccagcgat
ctggacaccgataccctgttccgtttgatcgatcgcctgctgatgttctatatccgcacc
ggcgaccggttgcagcgcaccagcgtctggctggataaccttgaaggcggcatcgactac
ctgcgtcaggtggtgatcgacgacagcctggggattgccgaagagctggaaaacgagatg
cgtcatgttatcgacagctaccagtgcgaatggcaaaccacgctggcgcatgacgagaat
cgggcgttgttccgcgccttcctcaacagcgacacgccggatgaagcggtggtgatggtg
ccggagcgcggtcagcctcgtccggctcgtctggaggagaagacgccgacaacggcatcg
gacgcgcccggcgcggaaggctggcagtgcgtcggtttcctcagcgatatcccggcgaat
gccggcatggcggcgcgggtcgggcatcagcaggtggccttgtttcatctgcctgccgct
cagccggggcaggcggggcacgtattcgcgctcgataatcaggaaccgggcagcggcgcc
aacgttctgtcgcgcggcattgtcggcgacgtggcgggtgagccggtggtgatttcgccg
ttgtacaaaaaacgtttgcgtctgcgtgacggcgtcagcccggatgacagtgaactgcgg
gtgcgcgcctggccggtgcgtgtcgtacaggatcgtatctgggtggcgaacgaaccgatg
gcagtagtcgcagccgacatggcggaggcgttatga
DBGET
integrated database retrieval system
