Dickeya dadantii 3937: Dda3937_01937
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Entry
Dda3937_01937 CDS
T01305
Symbol
sbcC
Name
(GenBank) exonuclease, dsDNA, ATP-dependent
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ddd
Dickeya dadantii 3937
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddd03400
]
Dda3937_01937 (sbcC)
DNA repair and recombination proteins [BR:
ddd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dda3937_01937 (sbcC)
Archaeal homologous recombinant proteins
Dda3937_01937 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
cobW
ABC_tran
AAA_21
nSTAND3
NTPase_1
zf-Mss51
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADM97341
UniProt:
E0SD24
LinkDB
All DBs
Position
complement(1207095..1210778)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTREPFASNSLFAITGPTGAGKTTLLDAICLALYHQTPR
LKVGPSQNELMTRHTAECLAEVEFEVKNVAYRAFWSQRRAHNSPEGNLQPPKVELALCAD
GKILTDKVNDKLALIADITGLDFERFTKSMMLSQGQFAAFLNADANQRAELLEELTGTDI
YGQISERVFEKHKDAQSQLETLRAQVATLELLSDEQRQALEQQLEAIRQQEQSLSLHREE
VLEHQRWYDTLLQHQQAQQQAQQQHAAQEQLQQQSQTQLDKLQRSEPAEKLRPRFDERER
ALREKQRLTHQLNSVRQQVGRQQDALNLLKTQLEKTLSARQQHAEHRQQQETLINERILP
LDHHIATQQAQRAQQQQALDSLLELQKTLIASLSKLQRQQEQTRQRLADIEAYRQQHSRH
QHLGSHIPLWQAQFPQQQKWQQDLQVLQEKAAQQQIQAEYLDQQRASLAEKQQAQQSACE
RARQLLTEHLQQDEQLEAEQPLANLRQQLARLMAERPDRQQLATSAAVLQQLMSQRTLLE
AQQLDTQRRIQTLEEQQTQQRQDYQRQADHLADLDKRHELELRIVSLERERQQLQPGKEC
PLCGSPHHPAVERYQALRPSETQLRLHALRQEVEALKASVVQTETQLQLQQQHRQQQQNA
LDSVRRDYESLQLQCKSVSERLLVDFDPLQLPALHQWIEDASAQEQSLQAQIASRERNQR
HIQESKDLLTSAQQLLAQTVQQLELNTQQQASLHASREELRLLLEKTERELQRLHDSLSQ
TLETFELTAPAIAQQEDWLRLRQTEWLRWQENEHEQHQCQPQLAALEAEIIASQQRQEET
DSAIKTYQQQLADTQRTLEQAQQQRWQLMGNQAVNDVLKQLRQVSQTLELESQQAQQQWQ
QGQSQQSRLNGEIDSLEQQNQHAETALQQLQAQFAEELTAAGFDDEAAFRHALLNEAERH
QLLTLKERLSQRQQQAEALLQQANSTLEQHMATRPESMPEGISDWDIRQLLSGLGDMVKT
EVEHQGQLRQQLASDQQRRDKQRLLLEAIARGQQQCDDWGYLNQLIGSQKGDKFRRFAQG
LTLDHLVFLANRQLSRLHGRYLLQRKASDTLELQVADTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSTKTRIDSLFLDEGFGTLDGETLDTALDVLDNLNASGKSIGVISHVEAMK
DRIQVQIRVRKRNGLGVSQLDSAYAVK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttagcctgcgcctgaaaaacctcaactcgctacagggcgagtggaaaatc
gatttcacccgcgagccgttcgccagcaacagcctgtttgccatcaccggccccaccggc
gcaggcaaaaccacgttgctggacgccatctgcctcgcgctgtaccaccagacgccgcgc
ctgaaagtcggccccagccagaacgagctgatgacgcgccacaccgccgaatgtctggcg
gaagtggaattcgaggtgaagaacgtcgcttaccgcgccttctggagccagcgtcgtgcc
cataacagcccggaaggcaatctgcagccgcccaaggtagagctggcgttgtgcgccgac
ggcaaaatcctcaccgacaaggtgaacgacaagctggcgctgattgccgatattaccggg
ctggattttgagcgtttcaccaaatcgatgatgctgtcccaggggcaattcgccgccttc
ctgaatgccgatgccaatcagcgtgccgagttgctggaagagctgaccggcaccgatatt
tacggccagatctcggagcgggtattcgagaaacacaaagacgcccagagccagctggaa
accctgcgggcgcaggtcgccacgctggagctgctgagcgacgagcagcgtcaggcgctg
gagcagcagttggaagccatccgtcagcaggaacagtcgctgtcgctgcaccgggaagag
gtgctggagcatcagcgctggtacgacacgctgttgcagcaccaacaggcgcaacagcag
gctcagcagcagcacgccgcgcaggaacaattgcagcaacagtcgcaaacgcagttggat
aaattgcagcgtagcgaaccagcggaaaaactgcgtccgcgctttgatgaacgcgagcgc
gcgctgcgggagaaacagcgcctgacccaccagttgaatagcgttcgccagcaggtcggc
cgccagcaggatgcgctcaatctgttgaaaacccagctggaaaaaacgctgtccgcccgc
cagcagcacgccgagcaccgccagcagcaggaaacgttgattaatgaacgtattctgccg
ctcgaccatcacatcgccacccagcaggcccagcgcgctcagcaacaacaggcgctggat
agtctgcttgaattgcagaaaacgctgatcgccagcctgagcaaactgcagcgccagcag
gaacagacgcggcaacggctggccgacatcgaagcctatcgccagcaacatagccgccac
cagcatctgggcagccatattccgctatggcaggcgcaatttccccagcagcagaaatgg
cagcaggacttacaggtactgcaggaaaaagcggcgcagcagcagattcaggcggagtac
cttgaccagcagcgcgcttcgctcgccgaaaaacagcaggcgcagcaaagcgcctgcgaa
cgcgcccggcaactgttgaccgaacatctgcaacaggatgaacaactggaggcggagcaa
ccgctggcaaacctgcgccagcaactggcccggcttatggccgagcggccggatcgccag
cagttagccaccagcgcagccgtgttacagcagttgatgagccagcgcaccttactggaa
gcgcaacagctggatacccagcgccgcattcagacgctggaagagcaacagacccagcag
cgtcaggactatcagcgccaggccgaccatctggccgacctcgacaagcgtcacgagctg
gagctgcgcatcgtcagtctggaacgcgagcgtcagcaactgcaaccgggcaaagagtgc
ccgctgtgcggctccccgcatcatccggcggtggagcgctatcaggcgctgcgcccgtcg
gaaacccagctccggctgcatgcgctgcgtcaggaagtcgaagcgctgaaagccagcgtg
gtgcagaccgaaacccagcttcagttgcaacaacagcaccgccagcagcagcaaaacgcg
ctcgacagcgttcgccgcgattacgagtcgctgcagttgcagtgcaaatcagtcagtgaa
cgcttacttgttgacttcgatccgctgcaactgccggccttgcatcagtggattgaagat
gccagcgcacaggagcagtcactgcaggcgcagatcgccagccgtgaacgcaatcagcgc
catattcaggaaagtaaggatttactcacctcggcgcagcaactgctggcgcaaaccgtc
cagcaactggagctgaacacccagcagcaggcgtcgctgcacgcctctcgggaagaactg
cggctgctgctggaaaaaaccgaacgcgagttacaacgccttcacgacagcctcagccag
acgctggaaacgttcgaactgacggcgcccgcgatcgcgcagcaggaagactggctgcgc
ctgcgccagacggaatggctgcgctggcaggaaaacgaacacgaacagcatcagtgtcaa
ccgcaactggccgcgctggaagcggaaatcatcgccagccagcagcggcaggaagaaacc
gactccgccatcaaaacctatcagcagcagttggccgatacccaacgcacactggaacag
gcgcagcaacagcgctggcaactgatgggcaatcaggcggtgaacgatgtgctgaagcag
ttgcggcaggtcagccagacgctggaactggaaagccagcaggcgcagcagcaatggcaa
cagggccagtcgcagcaaagccgcctgaacggggaaatcgacagtctggaacagcaaaac
cagcatgccgaaactgcattgcagcagcttcaggcccagtttgcggaagaactgaccgcc
gccggcttcgacgatgaagccgccttccgtcacgccttgctgaacgaagccgaacgccat
caactcctcacgctgaaagagcggctcagccagcgccagcagcaggcggaggcactgttg
cagcaggcgaacagcacgctggagcagcacatggcgacccggccggaatcgatgccggaa
ggcatcagcgactgggatatccgtcagttgctctccggactcggggacatggtgaaaacc
gaagtcgaacatcagggccaactgcgccagcagcttgccagcgatcagcaacgccgcgac
aaacagcgcctgctgctggaggcgatcgcccgcggtcagcaacagtgcgacgactggggc
tacctcaaccagttgattggctcgcagaaaggcgacaagttccgccgctttgcacagggg
ctgacgctggaccatctggtgtttctggctaaccgccagctatcacgcctgcatgggcgc
tatctgctgcaacgcaaggcatccgacactctggaattgcaggtggccgatacctggcag
gccgacgcggtgcgcgatacccgcacgctgtccggcggcgaaagcttcctggtcagtctg
gcgctggcgctggcgctatccgacctggtcagcaccaaaacccgtatcgactcgctgttc
ctcgacgaaggctttggcacgctggacggcgagacgctggataccgcgctggacgtgctg
gataacctgaatgcgtccggtaagagcatcggcgtcatcagccacgtggaagcgatgaaa
gaccgtatccaggtacaaatccgggtcagaaagcgcaacggtctgggcgtcagccagctc
gacagcgcgtacgcggtgaaataa
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integrated database retrieval system
