Dickeya dadantii 3937: Dda3937_02077
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Entry
Dda3937_02077 CDS
T01305
Symbol
fadB
Name
(GenBank) Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd00071
Fatty acid degradation
ddd00280
Valine, leucine and isoleucine degradation
ddd00310
Lysine degradation
ddd00362
Benzoate degradation
ddd00380
Tryptophan metabolism
ddd00410
beta-Alanine metabolism
ddd00640
Propanoate metabolism
ddd00650
Butanoate metabolism
ddd00907
Pinene, camphor and geraniol degradation
ddd00930
Caprolactam degradation
ddd01100
Metabolic pathways
ddd01110
Biosynthesis of secondary metabolites
ddd01120
Microbial metabolism in diverse environments
ddd01200
Carbon metabolism
ddd01212
Fatty acid metabolism
Module
ddd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Dda3937_02077 (fadB)
00650 Butanoate metabolism
Dda3937_02077 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
Dda3937_02077 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Dda3937_02077 (fadB)
00310 Lysine degradation
Dda3937_02077 (fadB)
00380 Tryptophan metabolism
Dda3937_02077 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Dda3937_02077 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Dda3937_02077 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Dda3937_02077 (fadB)
00930 Caprolactam degradation
Dda3937_02077 (fadB)
Enzymes [BR:
ddd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Dda3937_02077 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Dda3937_02077 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Dda3937_02077 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Dda3937_02077 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
Pyr_redox_2
NAD_Gly3P_dh_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
ADN00489
UniProt:
E0SLG7
LinkDB
All DBs
Position
4612994..4615183
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AA seq
729 aa
AA seq
DB search
MIYQGDTLYLNWLENGIAELVFAAPGSVNKLDTRTVASLGEALNHLKNQPSLRALLLRSD
KPAFIAGADITEFLSLFAAPPETLHQWLTEANAIFSQLEDLPVPTLSAINGYALGGGCEC
ALATDFRIATPDVRIGLPEVKLGIMPGFGGTVRLPRLLGADGALEIITAGKDLPAGEALK
VGLVDAVLDSDKLLPAALHMLRLAITDQLDWRDRRRQKQSPLRLNRIEAAMSFATANALV
QQAAGRHYPAPVMALKTIEAAAGLHRDAALKIETDNFVALTQTTAAHALVGVFLNEQAVK
SAAKQWAADASPPARVAVLGAGIMGGGIACQSARKGVPVWMKDISEKALTLGMEEAAKLL
NAQLERGKLDAMTMAGVLARIHPTLNNNGLEQADLIIEAVVENPQVKARVLAEAEACVSE
QTLIVSNTSTIPIGQLAVSLQRPQNFCGMHFFNPVHRMPLVEVIRGPQTDEKTLARVVAY
ASKIGKTPIVVNDCPGFFVNRVLFPYIAAFNLLMRDGADFRDVDTVMEKQFGWPMGPAYL
LDVVGLDTAHHAQAVMSAGFPQRMAKTYRDAVDVLVEHQRFGQKSGAGFYRYYPDAKGKP
HREQDEQTDILLDAVCEPKRTFSAQEIIHRLMVPMLNEVARCLEEGIVATPAEADMALLY
GLGFPPFHGGACRYLDTLGSQRYVDIAQSLASLGPLYAVPDSLLQMAQRRQRYYPAVEPH
ANLSLHQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcgacacgctgtacctcaactggctggaaaacggcattgccgaactg
gtttttgccgcgcccggcagcgttaataaattggatacccgcactgtagccagccttggc
gaggcgctaaaccatctgaagaaccaaccgtcactacgcgccctgctgttgcgctcggat
aaaccggctttcatcgccggtgcggatatcaccgaattcctgtcgctgtttgccgccccg
ccggaaacgttgcatcaatggctgaccgaagccaacgccattttcagccaactggaggat
ttgccggtcccgacgctctccgccatcaacggctatgcgctgggcgggggatgtgaatgc
gcgctggcgaccgacttccgcattgcgacgcctgacgttcgcatcggtctgccggaagtc
aaactggggatcatgccgggattcggcggcacagtccggctgccgcggttgctgggcgcg
gacggcgcgctggaaatcatcaccgccggtaaagacttgcccgccggcgaggccctgaaa
gtcgggctggttgacgccgtcctggacagcgacaaactgctgcccgccgccctgcatatg
ttgcgtctggcaataaccgaccaactcgactggcgtgaccgtcgccgccagaaacagtcg
ccgctacggcttaaccgtatcgaagccgccatgagtttcgccaccgccaacgcgctggtg
caacaggcggcgggccgccactaccccgcgccggtgatggcgctcaaaaccatcgaagcc
gccgccgggctgcaccgcgacgccgcactaaaaatcgaaaccgacaatttcgtcgcgctg
actcaaacgacggcggcgcatgcgctggtcggcgtcttccttaacgagcaggccgtaaaa
agcgccgccaaacaatgggccgccgacgcctcgccgccggcacgtgtcgcggtgctgggc
gccgggatcatgggcggcggcatcgcctgccagtcggcacgcaaaggggtgccggtgtgg
atgaaagacatcagtgaaaaagcgctgacactggggatggaagaagcggctaagctgctt
aacgcacagttggaacgcggcaaactggacgccatgactatggcgggggtgctggcccgc
atccacccgacactgaacaataacgggcttgaacaggccgacctgattatcgaagcggtg
gtggaaaacccgcaggtaaaagccagggtgctggcagaggcggaagcctgcgtcagcgag
cagacgctgatcgtctccaatacctcgacgattcccatcgggcagttagcggtctcattg
cagcggccgcaaaacttctgcggtatgcactttttcaatccggtgcatcgtatgccgctg
gttgaagtgattcgcggtccccagaccgatgaaaaaacgctggcccgcgtagtggcttac
gccagcaagatcggcaaaaccccgatcgtggtgaatgactgcccggggtttttcgtcaac
cgcgtactgttcccctacatcgccgccttcaacctgctgatgcgcgacggcgcggatttc
cgcgatgtggacacggtgatggagaagcagttcggctggccgatggggccggcttacctg
ttggacgtagtcggactggataccgctcatcacgctcaggcggtgatgtcggcaggcttt
ccgcagcgcatggcgaaaacctaccgcgacgccgtcgatgtgctggtggagcatcagcgt
ttcggccagaagagcggcgcgggcttctaccgctactatccggatgccaaaggcaaaccg
caccgggaacaggatgagcaaaccgatatcttgctggatgcggtctgcgaaccgaagcga
accttcagcgcgcaagagattatccatcgcctgatggtgccgatgctcaacgaagtggcg
cgctgtctggaagaaggcatcgtcgctaccccggcggaagccgacatggctctgctgtac
ggtctgggcttcccgccgttccacggcggcgcctgccgctatctggatacgctgggcagc
caacgctatgtggacatcgcccagtcgctggcgtcgctggggccgctctacgccgtgccg
gacagcctgttgcagatggcgcagcgccggcagcgctattacccggcggttgaacctcac
gccaatctttctcttcaccaaccggcataa
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