Dickeya dadantii 3937: Dda3937_02152
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Entry
Dda3937_02152 CDS
T01305
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Dda3937_02152 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddd03019
]
Dda3937_02152 (orn)
03009 Ribosome biogenesis [BR:
ddd03009
]
Dda3937_02152 (orn)
Messenger RNA biogenesis [BR:
ddd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Dda3937_02152 (orn)
Ribosome biogenesis [BR:
ddd03009
]
Eukaryotic type
Pre-60S particles
RNases
Dda3937_02152 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ADN00231
UniProt:
E0SI22
LinkDB
All DBs
Position
complement(4327194..4327745)
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AA seq
183 aa
AA seq
DB search
MATMVNENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNVLAEGPTLAVHQPDSQLALM
DDWNVRTHTASGLVDRVKASAFDEGAAERETIAFLQQWVPAGKSPICGNSIGQDRRFLFR
YMPELEAYFHYRYLDVSTLKELARRWKPEMLAGFKKRNTHQALDDIRESVAELAYYREHF
IQL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgatggtaaatgaaaacaacctgatctggatcgatttggaaatgacggggctt
gatcccgagcgggatcggatcatcgagatcgcaacgctggtgaccgatgccaacctgaac
gtactggcggaaggcccgacgctggcggtgcatcagccggacagccagctagcgctgatg
gatgactggaacgtgcgcactcacaccgccagcgggctggtggatcgggttaaagccagc
gcttttgacgaaggcgccgcggaacgggaaaccatcgcgttcctgcaacagtgggtgccg
gcgggcaaatcgccgatttgcggcaacagcatcgggcaggatcgccgttttctgttccgt
tacatgccggaactggaagcttactttcactaccgttatctggacgtcagcacgcttaag
gaactggcgcgccgctggaaaccggagatgctggccgggttcaaaaagcgtaacacccat
caggcgttggacgatatccgcgagtcggtggcggaactggcttactaccgcgagcatttc
attcagttgtag
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