Dickeya dadantii 3937: Dda3937_02339
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Entry
Dda3937_02339 CDS
T01305
Symbol
truB
Name
(GenBank) tRNA U55 pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ddd
Dickeya dadantii 3937
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddd03016
]
Dda3937_02339 (truB)
Enzymes [BR:
ddd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Dda3937_02339 (truB)
Transfer RNA biogenesis [BR:
ddd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dda3937_02339 (truB)
Prokaryotic type
Dda3937_02339 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADM96846
UniProt:
E0SKY3
LinkDB
All DBs
Position
678919..679875
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AA seq
318 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGASSNDVLQKVKRLFNANKAGHTGALDPLATGMLPVCLG
EATKFSQYLLDADKRYRVIARLGQRTDTSDADGNVIQERPVAFPHDLLMQALDSFRGETQ
QVPSMYSALKYQGRPLYEYARQGLVVPREARDITVYELQFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVATYPIERMVTLEQLQALREQAEAQEQPIGELLDVL
LLPMDTAVQAFPEVNLSPVVAGYLKLGQAVRAAATPAEGMVRITEGDEHRFIGMGEIDDE
GRVAPRRLVVEYPVPADA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtcctcgtcgccgcggccgggatatccacggcgttttgctgctggataaaccg
caaggagcatcgtccaacgatgtgctgcagaaggtaaaacgcctctttaatgccaacaaa
gccgggcataccggcgcgctggatccgctggcgaccggcatgttgccggtgtgtctgggg
gaagcgaccaagttttcccagtacctgttggatgccgataaacgctaccgggtgattgct
cgcctggggcagcgcactgatacctcggatgccgacggtaatgtgattcaggaacgcccg
gttgcctttccccatgacctgctgatgcaggcgctggacagtttccgtggcgagacccaa
caggtgccgtcaatgtattccgcgctgaaatatcagggtcgcccgctgtacgaatatgcg
cgtcaggggctggtcgtgccgcgtgaagcgcgtgatatcacggtgtatgaattgcagttt
atccgttgggaaggggatgagctggaactggaaattcattgctccaagggaacttacatc
cgcaccattattgatgacctaggcgagaagctggggtgcggtgcccatgtgatttatctg
cgccggttgcaggtggcgacttatccgatcgagcggatggtgaccctggaacagctacag
gcattgcgtgagcaggcggaagcgcaggagcagccgatcggcgaattgctggatgtgctg
ctgttgccgatggataccgccgtgcaggcgtttccggaagtgaatctgtcgccggtggtg
gcgggttatctcaagctgggccaggcggtgcgtgctgccgctacgccggctgagggtatg
gtacgcatcaccgagggtgatgagcatcggtttatcggtatgggggaaattgatgatgaa
ggtcgggtcgcaccgcgtcgtctggtagtggaataccctgtgccggcggatgcctga
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