Dickeya dadantii 3937: Dda3937_02479
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Entry
Dda3937_02479 CDS
T01305
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd03030
DNA replication
ddd03430
Mismatch repair
ddd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dda3937_02479 (holA)
03430 Mismatch repair
Dda3937_02479 (holA)
03440 Homologous recombination
Dda3937_02479 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddd03032
]
Dda3937_02479 (holA)
03400 DNA repair and recombination proteins [BR:
ddd03400
]
Dda3937_02479 (holA)
Enzymes [BR:
ddd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dda3937_02479 (holA)
DNA replication proteins [BR:
ddd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dda3937_02479 (holA)
DNA repair and recombination proteins [BR:
ddd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dda3937_02479 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ADM97507
UniProt:
E0SEU5
LinkDB
All DBs
Position
complement(1387597..1388628)
Genome browser
AA seq
343 aa
AA seq
DB search
MIRIYPEQLTAQLHEGLRGCYLLFGNEPLLLQESQDQIRTIARQQDFLEHFSFTLDNNTD
WDAIFSTCQALSLFASRQTLLLILPDAGPGAPGGEQLVKLSTLLHPDILLMVRGNKLTKA
QENSSWFKALSQQGVYVPCMTPEQEQLPRWVAHRAKNMKLELDDAASQLICYCYEGNLLA
LVQALERLSLLYPDGKLTLPRVEQAVNDAAHFTPFHWLDALLGGKSKRAWHILQQLRLEE
CEPVILLRTVQRELLLLLQLKRRMATTPLRTLLDQHKVWQNRRPLLTQALQRLSLTQLQQ
AITLLSRLEITLKQNYGQPVWAELETLSMILCGKALPDGLLEV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattcggatctatccggaacaactgaccgcgcagctccatgaggggctgcgcggctgt
tatctgctgttcggcaatgaacccttattgctgcaggagagtcaggatcagatccgcact
atcgcccgtcagcaggattttctggaacatttcagtttcacgctggataacaacaccgac
tgggacgccattttttccacctgtcaggcgctcagcctgttcgcatcccgtcaaaccctg
ctgctgattctgccggacgccggtcccggcgcccccggcggcgagcaactggtcaaactc
tccaccttgttgcatcccgacattctattgatggtcaggggcaacaagctcaccaaagcg
caggaaaacagctcctggttcaaagcgttgtcgcaacagggcgtgtacgttccctgcatg
acgcccgaacaggaacaactcccccgctgggtagcgcaccgggctaaaaacatgaagctg
gaactggatgacgccgccagccagttgatttgctattgctatgaagggaatctgctggcg
ttggtgcaagcgctggaacggctgtcgctgctgtatccggacggcaagctgacgctgccg
cgggtcgagcaggcggtcaacgatgccgcgcatttcacgccgttccactggctggatgcg
ctgctgggcggcaaaagcaaacgcgcgtggcacattttgcagcagttgcggctggaagag
tgcgagccggtcatcctgctgcgcaccgtacagcgggaattgctgctgctgctacagtta
aaacgacgtatggcgaccacgccgctgcgcaccctgcttgaccagcacaaagtatggcaa
aaccgacgtccgctgttgacacaggcgttacaacgcctgtcgctgacgcagttgcagcag
gctattaccctgctgagccggttggagatcaccctgaaacagaattacggacaaccggtc
tgggccgaactggaaacgctgtcgatgattctgtgcggtaaagcgctgcctgacggcctg
cttgaggtatag
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