Dickeya dadantii 3937: Dda3937_02485
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Entry
Dda3937_02485 CDS
T01305
Symbol
rlpA
Name
(GenBank) minor lipoprotein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ddd
Dickeya dadantii 3937
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddd01011
]
Dda3937_02485 (rlpA)
Enzymes [BR:
ddd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Dda3937_02485 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ddd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Dda3937_02485 (rlpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
ADM97501
UniProt:
E0SET9
LinkDB
All DBs
Position
complement(1381746..1382909)
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AA seq
387 aa
AA seq
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MRKDWVWIGAIGLALAGCAVTEQPQSPSPQATAYNGPVEEIGGAEPRYEPYKPANMQDYS
MNGKTYRIVKNPENFSESGFAAWHDRESVGNRTATGEEFDVNAMAAAHPTLPIPSYVRVT
NLSNGRRLVVRVNDRGPYTPGRIIDLTKGAADRLNLSNNTKVKVDFISVAPDGSLSGPGT
IGTRVAKQSFALPSRPTLGSSGLGTPVMESAPATAAAVRPISNATLTPTAGDGAGNIVSG
NPSVGNAGTPSGGSFLGAPKPLPSGVLEGSEPTPAATPARATAIAPAVAAAPGAVQPSRT
LSQPAVPAGSGNIVVQVGALSDQQRAQTWLKSLNERFRVPGKVTLNNGLYRIQLGPFQSR
QQAADLQQRLSSEAQQPSFITTVSGAQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaggattgggtttggattggcgcgatcggcctggcgctggcaggctgcgcggtt
acggaacagccgcagtctccctcaccgcaggccacggcatacaatggcccggtggaagaa
atcggcggcgcggaaccgcgctacgaaccgtacaaacccgccaacatgcaggattacagc
atgaacggcaaaacctaccgtattgtcaaaaacccggagaatttcagtgaaagcgggttt
gccgcctggcacgatcgggaatcggtcggtaaccgcacggcgacgggtgaagaattcgac
gtcaacgccatggccgccgcccaccccacgctgccgattcccagctatgtgcgggtcacc
aacctcagcaacggtcgccgtctggtggtacgcgtcaacgatcgcggtccttatacgccg
ggcagaatcatcgatctgaccaaaggcgcggcagaccgccttaatctgtccaacaatacc
aaggtgaaggtggactttatcagcgtggcgccggatggctcgctctccggccccggcacc
atcggcacccgtgtcgccaaacagagctttgccctgccgtcgcgcccgacgctgggctcc
agcgggctgggaacgccggtgatggaaagcgcaccggcgactgccgccgcggtgcggccg
atcagcaatgccacgttgacgccgacggcaggtgatggcgccggcaatatcgttagcggc
aacccatctgtcggcaatgccggcaccccgagcggaggcagcttcctcggcgcgcccaag
ccactgcccagcggagtgctggaaggctcggagccaacgcctgccgctacgccagccaga
gccaccgcgattgcacctgcggtcgcggctgcgccaggcgccgtacagccatcgcgcaca
ctgtcgcaaccggctgtgcctgccggttccggcaacatcgtggtgcaggtcggcgcgctg
agcgatcagcagcgagcacaaacctggctgaaaagcctgaacgagcgcttccgcgtacct
ggcaaagtcaccctgaataacggtttatatcgcatccagttggggccgttccagagccgt
cagcaagctgccgacctgcaacagcgcctttccagcgaagcgcaacagccgtcatttatc
accacggtgtccggcgcgcagtaa
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