KEGG   Dickeya dadantii 3937: Dda3937_02771
Entry
Dda3937_02771     CDS       T01305                                 
Name
(GenBank) Putative Rhs accessory genetic element
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
ddd  Dickeya dadantii 3937
Pathway
ddd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ddd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Dda3937_02771
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ddd02044]
    Dda3937_02771
Secretion system [BR:ddd02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Dda3937_02771
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Gp5_C Phage_Mu_Gp45
Other DBs
NCBI-ProteinID: ADM99133
UniProt: E0SIS4
LinkDB
Position
complement(3136161..3138014)
AA seq 617 aa
MANSTGLQFTVKVGALPDTTFAVVDFELSEALNQPFALSLNLASSQPGIDFGAVLDQPCE
LLVWYEGELQRRVSGIVSRFAQGDTGFRRTRYQAEVRPALWRLGLRTNARIFQTQKPDAI
ISTLLEEAGITDYAFALRHDHAVREYCVQYRESDLAFINRLAAEEGLFYFHEFEAGKHRV
VFADDAGALAKGPELFFNLATQGLSEGAYVRRFRYAEAVSTAEVALKDYSFKTPAYGLLH
NKMSSELAHQRESYQHFDYPGRFKQDPSGKAFTGYRLDALRAGAMTGNGESNAAELRPGS
SFTLTEHPNPAFNLAWQVVAVAHSGQQPQALEEESGGEPTTLSNSFEVVKATTTWRAALP
YKPMVDGPQIATVVGPAGEEIYCDEFGRVKLQFPWDRYGASDDQSSCWVRVSQGWAGGQY
GLIAIPRIGHEVVVSFLEGDPDQPIVTGRTFHATNPSPYPLPASKTRTSLRTSTHKGAGF
NELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTSVNASHTENVGGDQTVVVQHNQTVSVKE
NQVTEIQGEQTVAVTKNRHTTVDDNESLQVKKNIAIQSQSGDVLIATAGGFIAIDKDGNI
SITGKGLVLNGTRIDLN
NT seq 1854 nt   +upstreamnt  +downstreamnt
gtggccaacagtaccggattacagtttaccgtgaaggtcggcgcgttgccggacaccacc
ttcgcggtggtggattttgaactgagcgaggcgctgaaccagccgtttgcgctgtcgctc
aatctggccagcagccagcccggcatcgatttcggcgcggtgctggaccagccgtgcgag
ctgctggtgtggtacgaaggcgagttgcagcgccgggtcagcggtatcgtcagccgcttt
gcccagggcgacaccggttttcgccgcacccgctatcaggccgaagtgcgcccggcgctg
tggcgactgggcttgcgcaccaacgcccgtattttccagacccaaaaaccggacgcgatt
atcagtaccctgctggaagaagcgggtattaccgattacgcctttgccctgcgccatgac
cacgcggtgcgcgagtactgcgtgcagtaccgcgagagcgacctggcgttcatcaaccgg
ctggcggcggaagaagggctgttctacttccacgaattcgaagccggcaagcaccgggtg
gtgtttgccgacgacgccggcgcgttagccaaaggccccgagctgttcttcaatctcgcc
acacaagggttgtcggaaggcgcttatgtgcgccgtttccgttacgccgaagcggtgagc
accgccgaggtggcgctgaaggactacagcttcaaaaccccggcctacgggctactgcac
aacaagatgagcagcgagctggcgcaccagcgcgagtcctaccagcacttcgactacccc
ggtcgcttcaagcaggacccgagcggcaaggcgtttaccggctaccggctggacgccctg
cgcgccggggcgatgaccggcaacggcgaatccaacgccgccgaactgaggccgggcagc
agctttaccctgaccgagcacccgaacccggcgttcaatctggcctggcaggtggtggcg
gtggcccacagcggccagcagccgcaggcgctggaggaggaaagcggcggcgagccgacc
acgctcagcaacagcttcgaggtggtgaaagccaccaccacctggcgggcggcactgccg
tacaagccgatggtggacggcccgcagattgccaccgtggtcggcccggcgggtgaggag
atttactgcgacgaatttggccgggtgaaactgcagttcccgtgggaccgctacggtgcc
agcgacgaccagagctcctgctgggtgcgggtcagtcagggctgggccggtggtcagtac
gggttaatcgccattccgcgcatcggtcacgaggtggtggtgagctttctggagggtgac
ccggaccagcccatcgtcaccgggcgcaccttccacgccaccaacccgtcgccgtatccg
ctgccggccagcaagacccgcacctcgctgcgcaccagtacccataaaggggccgggttc
aacgagctgcgctttgaagaccaggccgggcaggaggaggtgtttatccatgcccagaag
gacatgaacacggtggtgctgaacaaccgcagtacgtcggtcaacgccagtcacaccgaa
aacgtgggcggcgaccagacggtggtggtgcaacacaaccagacggtgtcggtgaaggaa
aatcaggtcaccgagattcagggcgagcagaccgtcgccgtcaccaaaaaccgccacacc
accgtcgatgacaacgagtcgctgcaggtgaaaaaaaatatcgccatccagtcccagagc
ggcgatgtcctcattgccaccgccggcggcttcatcgccatcgacaaggacggcaacatt
tccattaccggtaaaggactggtgctgaacggcacccgtatcgatttgaactga

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