Dickeya dadantii 3937: Dda3937_02949
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Entry
Dda3937_02949 CDS
T01305
Symbol
recD
Name
(GenBank) exonuclease V (RecBCD complex), alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dda3937_02949 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddd03400
]
Dda3937_02949 (recD)
Enzymes [BR:
ddd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Dda3937_02949 (recD)
DNA repair and recombination proteins [BR:
ddd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dda3937_02949 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
NTPase_1
AAA_28
T2SSE
nSTAND3
AAA_24
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ADM98557
UniProt:
E0SCN3
LinkDB
All DBs
Position
complement(2498288..2500333)
Genome browser
AA seq
681 aa
AA seq
DB search
MNITRYDELTLLLDQWVECGWLRELDRALVRFLHQECPEASSLLLLGAALVSYQLGRGHV
CLDLDATLADSGFSLALPPEGDRSENRKIARPAEVLAGVTLSAWQAALQQPQLVSSGEGS
TPLVLVGARLYLRRYWRYEQDVRHAITQQLTQNDALRAAITPAALRQRLDALFPAAAAGS
ANWQKLACALAAGSAFSIITGGPGTGKTTTVVKLLALLQSLALEQHGKPLRIRLAAPTGK
AAARLNESIAGAIAGLTLDGLAQGEAIREQINSEVVTLHRLLGSRPDTRHFRHHADNPLM
LDVLVVDEASMVDLEMMAALLAAMPARSRLILLGDKDQLASVEAGALMGELCQRAAQGHY
LPQTRDWLREVAGDAPDDSLLDPQGSALDQSIAMLRHSYRFGADSGIGQLAEAVNAGDAA
ALASVWRQGYADLARLTLTANDNRALREWVIDGAADRFGAQPAAAAPVGYGDYLRRMAST
RPALTAPQSEFDMWAAQILDAFGQFQLLCALRNGPWGVDSMNERIAQLLYRDGLLAAWQG
WYPGRPVMVTRNDYSQRLMNGDIGITLQVPLLQPDGSWGWATRVAFPAGDGSSGIRWVLP
GRLSAVETVFAMTVHKSQGSEFAHTALLLPDSLSPILTRELVYTGITRAKHAFSLGCVGE
HSTVLAEAVGRRVLRVSGLVE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaacataacccgttatgacgaattaaccctgttgctggaccagtgggttgagtgcggc
tggttgcgggagctggatcgggcgttggtgcgctttctgcatcaagagtgcccggaggcg
tcgtccttgttgctgctgggcgcggcgctggtcagctatcagcttgggcgcgggcatgtg
tgcctcgatctggacgccacgcttgccgacagcgggttttcgctggcgctgccgccggaa
ggcgatcgcagtgaaaatcgtaagattgcgcgcccggcggaggttctggcgggcgttacc
ctgtcggcctggcaggcggcgttgcaacagccgcaactggtatcgtcgggggaaggcagc
acgccgctggtgctggtcggcgcgcgtctgtatctgcgccgttactggcgatacgagcag
gatgtgcgccacgccattacgcagcaactgacacaaaacgacgcgctgcgggcggcgata
acgccagcggcgctgcgccagcggttggatgcgctgtttcctgccgccgcggccggctcc
gccaactggcagaaactggcctgcgcgctggcggcgggcagtgctttcagcatcatcacc
ggcgggccgggcaccggaaaaaccaccaccgtggtgaaactgctggcgctgttgcagtcg
ctggcgctggaacagcacggtaagccgttgcggattcggctggcggcgcccaccggcaag
gcggcggcccgcctgaacgagtcgattgccggggccattgccggcctgacgctggatggg
ctggcgcagggcgaggctatccgggaacagatcaacagcgaggtggtgaccctgcaccgg
ttgctgggcagccggccggatacccggcatttccgtcatcacgccgataatccgctgatg
ctggatgtgctggtggtggatgaagcgtcgatggtggatctggagatgatggcggcgctg
ctggcggcgatgccggcccggtcccgcctgattctgctgggcgataaagatcaactggcg
tcggtggaagccggcgccttgatgggcgaactgtgccagcgcgccgcacaagggcattac
ctgccgcagacccgcgactggttacgcgaggtggcgggggacgcgccggacgattcgctg
ctcgacccgcaaggcagcgcgctggatcaatccatcgccatgctgcgtcacagctaccgc
tttggcgctgacagcggcatcggccaactggcggaggcggtgaacgccggcgatgcggcg
gcgttggcgtctgtctggcggcaggggtatgccgacctggcgcgcctgacgttgacggcg
aatgataaccgcgcgctgcgtgaatgggttattgacggcgccgccgatcggttcggcgct
cagcctgctgcggcggcaccggtgggctacggcgactacctgagacggatggcctcgaca
cggccggcgctgacggcgccgcaaagcgagttcgacatgtgggcggcgcagattctggac
gccttcggccagttccaactgctatgcgcgttgcgcaacgggccgtggggcgtcgacagt
atgaatgagcgcatcgcccaactgctgtatcgggacggcttgctggcggcctggcaaggc
tggtatccggggcggccggtgatggtgacccgcaacgattatagccagcggctgatgaac
ggcgatatcggcatcaccctacaggtgccgctgctccagccggacggctcatgggggtgg
gcgaccagggtggcgtttccggccggcgatggctcatcgggtatccgctgggtgctgccg
gggcgactgtccgcggtggaaacggtgttcgccatgacggtgcacaaatcccaggggtcg
gaattcgcccacaccgccttgctgctgccggattctttaagcccgatcctgacccgcgaa
ctggtgtacaccggtattacccgcgccaaacacgcgttcagcctcggctgcgtgggggag
cacagcacggtgctggcggaggcggtcggccggcgggtgttgcgggtaagcggactggtg
gaataa
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