Dickeya dadantii 3937: Dda3937_03216
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Entry
Dda3937_03216 CDS
T01305
Symbol
virA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd00300
Lysine biosynthesis
ddd00470
D-Amino acid metabolism
ddd01100
Metabolic pathways
ddd01110
Biosynthesis of secondary metabolites
ddd01120
Microbial metabolism in diverse environments
ddd01230
Biosynthesis of amino acids
Module
ddd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dda3937_03216 (virA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dda3937_03216 (virA)
Enzymes [BR:
ddd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Dda3937_03216 (virA)
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Ortholog
Paralog
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
WYL
Motif
Other DBs
NCBI-ProteinID:
ADN00589
UniProt:
E0SMF0
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All DBs
Position
4713410..4714732
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AA seq
440 aa
AA seq
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MADPTPPVAAEAGSLFANGYVEEIPVANIADRIGTPFYVYSARQLRRQLQQLRQQLPTGT
AIYYSLKANPNLSVVRALAEQGAGCEVCSPAELKTALAAGVSPQHILYVGPGKSLPALKL
AIDCGIRAIVVESVTELDNLNRLAARANTVQTVALRINPDFSSAHARLVMSGKPTQFGMM
RDTLHTVLASLHRWPSISLRGFHVYLGTRILNAQAIADNTRNILQLALDLRDTHRLTLDF
VDVGGGFGVPYFPKETPLDLPALGAAIASIVADFRRRAADTQIIIELGRYLVAEAGLFVT
RVNTLKTAGGKTFAVCDGGANCHSAAAGLNSMLRKNFPLLRLGDNQGRPLQPYQVSGPLC
TPTDLLGDNVLLPTLEVDDLIGITHSGAYGLTASPGSFLSFGYPVEVMVDGRRLTLIRQP
ETTEQLLARQQPVDLCGDTP
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccacccctcccgttgctgctgaggcgggttcgctgttcgccaacggctat
gtagaagagattcctgttgccaatattgccgaccgcatcggcacgcctttctatgtttac
agcgcccgtcagctacgccgccagcttcagcagctacgccagcaactgccaaccggaacc
gcaatttattattctttgaaagccaatcctaatctttcggtggttagagcgttggcggaa
cagggggcggggtgcgaggtctgctcgccagccgagctgaaaaccgcgttggcggcaggc
gtctcaccgcagcacatcctgtatgtcgggccgggcaaatccctgccggcgctgaaactc
gccattgactgcggcatccgggcaattgtggtggagtcggtaacagagctggataacctc
aaccggctggccgcacgggccaataccgtgcagacggtggcgctgcgcatcaatccggat
ttcagcagcgcgcacgcccggctggtgatgagcggcaaacctacccagttcggcatgatg
cgggataccctgcataccgtgctggccagcctgcaccgctggccttccatttccctgcgc
ggttttcatgtttatctgggtacccgaatcctcaatgcccaggccatcgccgacaacacc
cgtaatattctgcaactggcgctggatctacgtgatacgcaccggttaacgctggatttc
gtcgatgtcggcggcggtttcggcgtgccctattttccgaaggaaacgccgttggatctg
ccggcgttaggtgcggccatcgcgtcgatcgtggcggatttccgccgccgggccgccgac
acgcaaatcatcatcgaactgggacgttatctggtggcggaagccggcctgttcgtcacc
cgggtcaacaccctgaaaaccgccggcgggaaaacgttcgccgtctgtgacggcggcgcc
aattgccacagtgcggcggccggcctgaacagcatgctgcgcaaaaactttccgttgttg
cggctgggcgacaaccaggggcggccgttgcagccttatcaggtcagcgggccgctttgc
acgcccaccgatctgctgggcgacaatgtgctgctaccgacgctggaggtcgacgacctg
atcggcatcacccactccggcgcttacgggctaaccgcgtcgccgggttcgttcctcagt
ttcggttacccggtggaagtgatggtggacggtcgacgcctcacgctgatacgccagccg
gaaaccacggaacaactgctggcccggcaacagccggtcgacctctgcggggatacgcca
tga
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