KEGG   Dickeya dadantii 3937: Dda3937_03216
Entry
Dda3937_03216     CDS       T01305                                 
Symbol
virA
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
ddd  Dickeya dadantii 3937
Pathway
ddd00300  Lysine biosynthesis
ddd00470  D-Amino acid metabolism
ddd01100  Metabolic pathways
ddd01110  Biosynthesis of secondary metabolites
ddd01120  Microbial metabolism in diverse environments
ddd01230  Biosynthesis of amino acids
Module
ddd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ddd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Dda3937_03216 (virA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Dda3937_03216 (virA)
Enzymes [BR:ddd01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Dda3937_03216 (virA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N WYL
Other DBs
NCBI-ProteinID: ADN00589
UniProt: E0SMF0
LinkDB
Position
4713410..4714732
AA seq 440 aa
MADPTPPVAAEAGSLFANGYVEEIPVANIADRIGTPFYVYSARQLRRQLQQLRQQLPTGT
AIYYSLKANPNLSVVRALAEQGAGCEVCSPAELKTALAAGVSPQHILYVGPGKSLPALKL
AIDCGIRAIVVESVTELDNLNRLAARANTVQTVALRINPDFSSAHARLVMSGKPTQFGMM
RDTLHTVLASLHRWPSISLRGFHVYLGTRILNAQAIADNTRNILQLALDLRDTHRLTLDF
VDVGGGFGVPYFPKETPLDLPALGAAIASIVADFRRRAADTQIIIELGRYLVAEAGLFVT
RVNTLKTAGGKTFAVCDGGANCHSAAAGLNSMLRKNFPLLRLGDNQGRPLQPYQVSGPLC
TPTDLLGDNVLLPTLEVDDLIGITHSGAYGLTASPGSFLSFGYPVEVMVDGRRLTLIRQP
ETTEQLLARQQPVDLCGDTP
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggctgaccccacccctcccgttgctgctgaggcgggttcgctgttcgccaacggctat
gtagaagagattcctgttgccaatattgccgaccgcatcggcacgcctttctatgtttac
agcgcccgtcagctacgccgccagcttcagcagctacgccagcaactgccaaccggaacc
gcaatttattattctttgaaagccaatcctaatctttcggtggttagagcgttggcggaa
cagggggcggggtgcgaggtctgctcgccagccgagctgaaaaccgcgttggcggcaggc
gtctcaccgcagcacatcctgtatgtcgggccgggcaaatccctgccggcgctgaaactc
gccattgactgcggcatccgggcaattgtggtggagtcggtaacagagctggataacctc
aaccggctggccgcacgggccaataccgtgcagacggtggcgctgcgcatcaatccggat
ttcagcagcgcgcacgcccggctggtgatgagcggcaaacctacccagttcggcatgatg
cgggataccctgcataccgtgctggccagcctgcaccgctggccttccatttccctgcgc
ggttttcatgtttatctgggtacccgaatcctcaatgcccaggccatcgccgacaacacc
cgtaatattctgcaactggcgctggatctacgtgatacgcaccggttaacgctggatttc
gtcgatgtcggcggcggtttcggcgtgccctattttccgaaggaaacgccgttggatctg
ccggcgttaggtgcggccatcgcgtcgatcgtggcggatttccgccgccgggccgccgac
acgcaaatcatcatcgaactgggacgttatctggtggcggaagccggcctgttcgtcacc
cgggtcaacaccctgaaaaccgccggcgggaaaacgttcgccgtctgtgacggcggcgcc
aattgccacagtgcggcggccggcctgaacagcatgctgcgcaaaaactttccgttgttg
cggctgggcgacaaccaggggcggccgttgcagccttatcaggtcagcgggccgctttgc
acgcccaccgatctgctgggcgacaatgtgctgctaccgacgctggaggtcgacgacctg
atcggcatcacccactccggcgcttacgggctaaccgcgtcgccgggttcgttcctcagt
ttcggttacccggtggaagtgatggtggacggtcgacgcctcacgctgatacgccagccg
gaaaccacggaacaactgctggcccggcaacagccggtcgacctctgcggggatacgcca
tga

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