Dickeya dadantii 3937: Dda3937_03371
Help
Entry
Dda3937_03371 CDS
T01305
Symbol
pelE
Name
(GenBank) pectate lyase pelE
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd00040
Pentose and glucuronate interconversions
ddd01100
Metabolic pathways
ddd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dda3937_03371 (pelE)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dda3937_03371 (pelE)
Enzymes [BR:
ddd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dda3937_03371 (pelE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ADM99551
UniProt:
P0C1A5
LinkDB
All DBs
Position
3575502..3576716
Genome browser
AA seq
404 aa
AA seq
DB search
MNNSRMSSVSTQKTTGRSALGTKSALAAIIATTMMVSVASAASLQTTKATEAASTGWATQ
SGGTTGGAKASSSKIYAVKSISEFKAALNGTDSSPKIIQVTGAIDISGGKAYTSFDDQKA
RSQISIPSNTTIIGIGNKGKFTNGSLVVKGVSNVILRNLYIETPVDVAPHYEEGDGWNAE
WDAVVIDSTDHVWVDHVTISDGSLTDDKYTTKNGEKYVQHDGSLDIKRGSDYVTVSNSRF
ELHDKTILIGHSDNNGSQDAGKLRVTFHNNLFDRVGERTPRVRFGSVHAYNNVYVGDVNH
KAYRYQYSFGIGTSGSLLSESNAFTIDNMKKISGRDKECSVVKAFNGKIFSDKGSIINGA
SYNLNGCGFGFSAYSAKIPYKYSAQTITTSLANSISSNAGYGKL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactcacgtatgtcttccgtttcaacacagaaaacaacaggacgttctgccttg
ggaaccaaaagcgcgctggcggcgattatcgccaccaccatgatggtctcagtcgcttcc
gccgccagtctgcaaaccaccaaagcgacagaagcggcgtcaaccggctgggcaacgcag
agcggcggcaccaccggcggcgccaaagcgtcatcatccaaaatctacgcggtgaaaagc
atcagcgaattcaaagcagcactgaacggaaccgattcgtcgcccaagatcatccaggtc
accggagcaattgatatcagcggcggtaaagcctacaccagctttgacgatcagaaagcc
cgcagccagatcagcattccgtccaacaccaccatcatcggtattggcaacaaaggcaaa
ttcaccaacggttcgctggtggtgaaaggcgtcagcaacgttatcctgcgtaacctgtac
atcgaaacgccggtggacgtggcgccgcattacgaagagggagatggttggaacgccgag
tgggacgcagtagtgattgacagcacagaccacgtctgggttgaccatgtcaccatcagc
gacggcagcctcaccgacgacaaatacaccaccaaaaacggcgaaaaatatgtgcagcat
gacggctcgctggatatcaagcgcggctccgactacgttaccgtttctaatagccgcttc
gagctgcacgacaaaaccatcctgatcggccacagcgacaacaacggctcgcaggacgcc
ggcaaactgcgcgtcaccttccacaacaacctgtttgaccgggtcggcgaacgtaccccg
cgcgtacgcttcggcagcgttcacgcttacaacaacgtttacgttggcgacgtcaaccac
aaagcctatcgctatcagtacagcttcggtatcggcaccagcggtagcctgctgtctgag
tccaacgcgtttaccattgataacatgaaaaaaatcagcggccgcgacaaagaatgcagc
gtggtcaaggcgtttaacggtaagatcttctctgataaaggctcgatcatcaacggcgct
tcgtacaatctgaatggttgcggctttggcttcagcgcatacagcgccaagatcccgtac
aaatactcagcccaaaccatcaccaccagcctggcaaacagcatcagcagcaacgcgggc
tacggtaaactgtaa
DBGET
integrated database retrieval system
