Dickeya dadantii 3937: Dda3937_03380
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Entry
Dda3937_03380 CDS
T01305
Symbol
yfhD
Name
(GenBank) lytic transglycosylase
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
ddd
Dickeya dadantii 3937
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddd01011
]
Dda3937_03380 (yfhD)
Enzymes [BR:
ddd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Dda3937_03380 (yfhD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ddd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Dda3937_03380 (yfhD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
ADM99560
UniProt:
E0SB01
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All DBs
Position
3590321..3591778
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AA seq
485 aa
AA seq
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MKRLTINYVFIGVIALLLTLALWPNIPWRSHQDVQLRQILSRGELRISTVTSPLTYTLSN
GSPTGLDYELAKRFADYLGVRLVVSVRQNVDDLFGDLDNDNADLLAAGLIYNRERLSRFR
AGPSYYSVSQQLVYRMGTARPSALDKLQGKLAVLSGSAHAATLRDFKAGKYPQLSWEVAT
DLSELDLLKQVAEGKLDYTIADSINIGLMQRIHPQLAVSFDLSDEEPVTWYMRQNHDDSL
SAALLDFFSQMMEDGTLARLEEKYLGHVGEFDYVDTTTFLSAIDNTLPGLRSLFEKYARE
IDWKLLAAISYQESHWNPLATSPTGVRGLMMLTRNTADSLDVADRLNPEESIRGGARYLN
QMMQQVPATIPTDERIWFALAAYNMGYAHMMDARKLTEKQKGNPDSWADVKVRLPMLSQK
RYYAQTANGYARGQEAYNYVENIRRYMVSLVGYLSEKESRALQQQLAASAYPAVPPEQLT
ANPSR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcgtttaacgataaattatgttttcatcggggtgatcgctttgctgttgacgctg
gcactgtggccaaatattccctggcgcagtcaccaggatgttcagctaaggcaaatcctt
tcacgtggcgagctgcgcatcagcaccgtgacctctccgctgacctatacgctcagcaac
ggttcccccaccggactggactacgaactggccaaacgattcgccgactacctcggcgtg
cggctggtggtatcggtgcgccaaaacgtcgacgatctgttcggcgatctggataacgac
aatgccgacctgctggccgccggcctgatttataaccgggagcgcctgagccgtttccgg
gccggtccttcctattattcggtgtcgcagcaactggtctatcgcatgggtacggctcgc
cccagcgcgctggacaagttacagggcaaactggccgtattgtccggctcggcgcacgcc
gcgacgctgcgcgatttcaaagccggtaaatacccgcaactgagttgggaggtcgccacc
gacctgtccgaactggacttactaaagcaggtggcggaaggaaaactggattacaccatc
gccgactcaatcaacatcggcctgatgcagcgtattcacccgcagttggcggtgtcgttc
gacctcagcgacgaagagccggtcacctggtatatgcggcaaaaccatgacgatagtctc
tccgccgcgctgctcgacttcttcagccagatgatggaagacggtaccctcgcccgtctg
gaagagaagtacctcgggcatgtcggcgagttcgactatgtggataccaccaccttcctc
agcgccatcgacaatacgctgccgggcctgcgttcgctgttcgagaaatacgccagagag
atcgactggaaactgctggcggccatttcatatcaggaatcgcactggaacccgctggcg
acctcgccgaccggggtgcgcggcttgatgatgctgacccgcaataccgctgacagcctg
gatgtggcggacagactcaatccggaagaaagcatccgcggcggcgccagatacctgaat
cagatgatgcagcaggtgccggccaccatcccaacggacgaacgcatctggtttgcgcta
gccgcctacaacatggggtacgcccatatgatggatgcccgtaaactgacggaaaaacag
aaaggcaatccggatagttgggccgacgtcaaagtacgcctgccgatgctgagccagaaa
cgctattacgcccagaccgccaacggttacgcacgcggtcaggaggcttacaactacgtg
gaaaacatccggcgctatatggtcagcctggtcgggtatctatcggagaaagaaagccgg
gcgttgcaacagcaactggccgccagcgcttaccccgccgtaccaccggaacagttaacc
gccaatccttcccgctga
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