Dickeya dadantii 3937: Dda3937_03467
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Entry
Dda3937_03467 CDS
T01305
Symbol
uvrA
Name
(GenBank) ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
KO
K03701
excinuclease ABC subunit A
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dda3937_03467 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddd03400
]
Dda3937_03467 (uvrA)
DNA repair and recombination proteins [BR:
ddd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dda3937_03467 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dda3937_03467 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_25
AAA_23
NACHT
nSTAND3
Viral_helicase1
cobW
BCA_ABC_TP_C
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
ADM99956
UniProt:
E0SFA4
LinkDB
All DBs
Position
complement(4009655..4012486)
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AA seq
943 aa
AA seq
DB search
MDKIEIRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PEHDIPLDAQTVSQMVDNVLSQPEGKRLMLLAPIVKERKGEHTKTLENLATQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRNDLAQRLAESFETALELSGGTAVVADMDDP
NAPELVFSANFACPVCGYSMHELEPRLFSFNNPAGACPTCDGLGVQQFFDPARVVQNGEL
SLAGGAIRGWDRRNFYYFQMLRSLADHYQFDVEAPFDSLSPAVQKVILYGSGKENIEFKY
INDRGDTSVRRHPFEGVLNNMERRYKETESTAVREELAKFISNRPCASCGGTRLREEARH
VYVEQTTLPQIADMSIGHAMEFFHNIKLSGQRAKIAEKVLKEIGDRLRFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGQVIAEGTAAQIMAEPESLTGQFLSGARKIEI
PAQRIPADPGKVLKLIGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGGELNEPAAYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPIRELFAGVPE
ARSRGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKSIHEVLEMTIEEAREFFDAIPALARKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLAVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAQCEKSHTARFLKPILERG
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaaattcgtggtgcccgtacccataacctgaagaatatcaacctgatt
attccacgcgataaactgatcgtcgtgacggggttatccggttctggcaaatcctcgctg
gcgttcgatacgctgtatgccgaagggcagcgtcgttatgtggagtcgctgtcggcctac
gcccgccagttcctgtcgctgatggaaaagccggatgtggaccacatcgaagggttgtcg
cccgccatttccatcgagcagaaatccacgtcgcacaacccgcgttccaccgtcggcacc
atcaccgaaatccacgattatctccgtctgttgttcgcccgcgtcggcgagccgcgctgc
ccggaacacgatattccgcttgatgcccagaccgtcagccagatggtggacaacgtcttg
tcgcagccggaaggcaagcggctgatgctgctggcgccgatcgttaaagagcgcaagggc
gagcacaccaaaacgctggaaaacctggcgacgcagggctacatccgcgcccgcatcgac
ggcgaagtgtgcgacctgtcggacccgccgaagctggagttgcagaaaaaacacaccatc
gaagtggtggtggaccggtttaaagtgcgcaacgatttggcgcagcgtctggccgagtcg
tttgaaaccgcgctggagctgtccggcggcaccgccgtggtggcggacatggacgacccg
aacgcgcctgagctggtgttctccgccaacttcgcctgcccggtgtgcggctatagcatg
catgaactggagccccggctgttttcattcaacaacccggcaggcgcctgcccgacctgc
gacgggcttggcgtgcagcagtttttcgatccggcgcgcgtggtgcagaacggtgagtta
tcgctggccggcggcgctattcgcggctgggatcgccgtaacttctattatttccagatg
ctgcgctcgctggcggatcattaccaattcgacgttgaagcgccgttcgatagccttagc
ccggcggttcagaaggtgattctgtacggttccggcaaggaaaatatcgagttcaaatac
atcaacgatcgcggcgatacctcggtgcgccgccatccgttcgaaggggtgctcaacaat
atggagcgccgctacaaagaaaccgaatcgaccgcggtgcgcgaggaactggcgaagttc
atcagcaaccggccgtgcgccagctgtggcggcacccgcctgcgtgaagaggcgcgtcac
gtctatgtggaacagactacgctgccgcagattgccgacatgagcatcggccacgcgatg
gagtttttccacaacatcaagctgagcggccagcgggcgaagatcgccgaaaaagtattg
aaggaaatcggcgaccgcctgcgctttctggttaacgtcggcttgaattacctgtcgctg
tcgcgctcggcggagacgttgtccggcggcgaggcgcagcgtattcgtctggccagccag
attggcgccggcctggtcggcgtgatgtacgtgctggacgaaccgtctatcggcctgcac
cagcgcgacaacgagcgcctgctggagacgctgatccacctgcgtaatctcggcaacacg
gtgattgtggtggaacacgatgaagacgccatccgcgccgccgatcacatcatcgacatc
ggccccggcgcgggcgttcacggcgggcaggtgatcgccgaagggaccgccgcgcagatc
atggcggagccggaatcgctgaccggccagttcctgagcggcgcgcgcaaaatcgagatc
ccggcgcagcgcataccggcggatccgggtaaagtcctcaagctgattggcgcacgcggc
aacaatctgaaagacgtcaccctgaccctgccggtcgggctgttcacctgcattaccggg
gtgtccggttccggcaagtcgacgctgatcaacgataccctgttcccgatcgcccagcgc
cagctcaacggcggcgagctgaacgaaccggcggcgtaccgcgatattcaggggctggag
catttcgacaaggtgatcgacatcgatcaaagcccgatcggccgtacaccgcgctcgaat
ccggccacctacaccggcgtgttcacgccgatccgcgagttgttcgctggcgtgccggaa
gcgcgcagccgcggttataaccccggccgtttcagctttaacgtgcgcggcgggcgttgc
gaagcctgtcagggcgatggcgtgatcaaggtggaaatgcacttcctgccggatatttac
gtcccctgcgatcaatgcaaaggcaaacgctataaccgcgagacgctggagatcaaatac
aaaggcaagagcatccacgaagttctggagatgactatcgaggaagcgcgcgagttcttc
gacgccattccggcgctggcgcgtaaactgcaaacgctgatcgatgtcggtttgtcctac
atcaggttggggcagtcggccaccaccttgtccggcggcgaggcgcagcgcgtgaagctg
gcgcgtgagctgtcgaaacgcggcaccgggcagacgctctatattctggacgaacccacc
accggcctgcactttgccgatatccagcaactactggcggtactgcatcagttgcgcgat
cagggcaacaccattgtggtgatcgaacataatctggacgtgatcaaaaccgcggactgg
atcgtggatctggggccggagggtggcagcggcggcggcgagattctggtttccggcacg
cctgaaacggtggcgcagtgcgagaaatcccacaccgcccgtttcctgaagccgattctg
gaacgtggttaa
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