Dickeya dadantii 3937: Dda3937_03850
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Entry
Dda3937_03850 CDS
T01305
Symbol
rnc
Name
(GenBank) RNase III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Dda3937_03850 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddd03019
]
Dda3937_03850 (rnc)
03009 Ribosome biogenesis [BR:
ddd03009
]
Dda3937_03850 (rnc)
03036 Chromosome and associated proteins [BR:
ddd03036
]
Dda3937_03850 (rnc)
Enzymes [BR:
ddd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Dda3937_03850 (rnc)
Messenger RNA biogenesis [BR:
ddd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Dda3937_03850 (rnc)
Ribosome biogenesis [BR:
ddd03009
]
Eukaryotic type
90S particles
RNase
Dda3937_03850 (rnc)
Prokaryotic type
rRNA processing factors
Dda3937_03850 (rnc)
Chromosome and associated proteins [BR:
ddd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Dda3937_03850 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ADM99577
UniProt:
E0SBH3
LinkDB
All DBs
Position
complement(3604769..3605449)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPILINRLQKKLGYTFQQYDLLLQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSNIQTVERLILQWYQTRLDEISPGDKQKDPKTRLQEFLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGFSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatcctgataaatcgtttacaaaaaaagctgggctatactttccaacaatat
gaccttttattgcaggcgctgactcaccgtagcgccagcagtaaacataacgaacggctg
gagttcctgggggattccattctgagttttgttatagccaatgcgctctatcaccgtttt
ccgcgtgttgacgaaggcgacatgagccggatgcgcgctacgctggtgcgcggtaatacg
ctggcggagattgcccgagagtttgaactgggcgagtgcctgcgtcttggtcccggtgaa
ttgaaaagcggcggttttcgccgtgagtcgattctggcggataccgtggaagcgttgatt
ggcggcgtgtttctggacagcaatatccagaccgtcgagcggctgattctgcagtggtac
cagacccgtctggatgagattagcccgggcgacaagcaaaaagatccgaaaacccgcctg
caggaattcctgcagggacgccatctgccgttgcctacctatctggtggtgcaggtgcgt
ggcgaggcgcacgatcaggaatttaccattcattgccaggtcagcgggtttagcgagccg
gtagtgggtaccgggtcaagccgccgtaaagctgaacaggctgcggcggaacaggccctg
aaaaagctggagcttgaatga
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