Dickeya dadantii 3937: Dda3937_03944
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Entry
Dda3937_03944 CDS
T01305
Symbol
ffh
Name
(GenBank) Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd02024
Quorum sensing
ddd03060
Protein export
ddd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Dda3937_03944 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Dda3937_03944 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dda3937_03944 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ddd02044
]
Dda3937_03944 (ffh)
Enzymes [BR:
ddd01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Dda3937_03944 (ffh)
Secretion system [BR:
ddd02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Dda3937_03944 (ffh)
Eukaryotic Sec-SRP protein
Dda3937_03944 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_30
cobW
AAA_31
KTI12
VirC1
AAA_33
YqeC
APS_kinase
AAA_24
AAA_16
Fe-ADH_2
Mg_chelatase
ATP_bind_1
AAA_14
TsaE
Helicase_RecD
Rad17
Motif
Other DBs
NCBI-ProteinID:
ADM99662
UniProt:
E0SC65
LinkDB
All DBs
Position
complement(3692439..3693800)
Genome browser
AA seq
453 aa
AA seq
DB search
MFENLTDRLSRTLRNISGRGRLTEDNIKDTLREVRMALLEADVALPVVRDFINRVKEQAV
GHDVNKSLTPGQEFVKIVQNELVTAMGEVNQALNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLREKQKKKVLVVSADVYRPAAIKQLETLAETVGVDFFPSEAHEKPIDIVNRALQHAK
LKFYDVLLVDTAGRLHVDDAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVILTKIDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFYPDRIASRILGMGDV
LSLIEELESKVDRSQAEKLAKKLKKGDGFDLTDFLDQLKQMRNMGGMASMMSKLPGMGQI
PDNVKSQMDDKVLVRMEAIINSMTQQERAKPEIIKGSRKRRIAMGAGMQVQDVNRLLKQF
DDMQRMMKKMKNGGLAKMMRGMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatttaaccgatcgactatcgcgcactctgcgcaatatcagcggccgtggg
cggctgacggaagacaatatcaaggatacgctgcgtgaagtccgtatggcgctgctggaa
gcggacgtggcgctgccggtggtgcgtgatttcatcaatcgtgtaaaagagcaggcggtt
ggtcacgacgtcaacaagagcctgacgccggggcaagagttcgtcaagattgttcagaac
gagctggtgaccgccatgggcgaagtcaaccaggcgctcaatctggccgcacagccgccg
gcggtggtgctgatggcgggcctgcaaggggcgggtaaaaccaccagcgttggtaagctg
ggtaaattcctgcgtgaaaaacagaagaagaaagtgctggtcgtgtcggcggacgtgtat
cgccctgcggcgatcaagcagttggaaacgctggcggagaccgttggcgttgatttcttc
ccctcggaagcgcatgaaaagcctatcgatatcgttaaccgcgcgttgcagcacgccaaa
ctgaagttctacgatgttctgctggtggataccgccggtcgtttgcatgtcgatgacgcc
atgatggacgaaatcaagcaggtacatgcgtcgatcaatccggtggaaaccctgtttgtg
gttgacgctatgaccggtcaggatgcggcgaatacggctaaagcttttaacgaagcgctg
ccgttgaccggggtgattctgaccaagatcgatggtgatgcccgtggtggtgcggcgctg
tctatccgccatattaccggcaaaccgatcaaattcctgggcgtcggcgagaagaccgac
gcgctggagcctttctacccggaccgtatcgcttcgcgcattctcggtatgggcgatgtg
ctctcgctgattgaggaactggaaagcaaggtcgaccgttctcaggccgagaaactggct
aaaaaactgaagaaaggcgatggctttgatctgaccgatttcctggatcagctaaagcag
atgcgcaatatgggcggtatggccagcatgatgagcaagctgccgggcatggggcagatt
ccggataacgtgaaatcgcagatggatgacaaggtgctggtgcggatggaggcgattatc
aactccatgacgcaacaggagcgcgccaaaccggagatcatcaaaggttcgcgtaagcgt
cgcattgcgatgggggccggcatgcaggtgcaggatgtcaaccgactgctaaaacagttt
gatgatatgcagcgcatgatgaaaaagatgaagaatggcggcctggccaagatgatgcgc
ggcatgaaagggatgatgccgccaggttttccgggtcgctga
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