Dickeya dadantii 3937: Dda3937_04193
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Entry
Dda3937_04193 CDS
T01305
Symbol
pelB
Name
(GenBank) pectate lyase B
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd00040
Pentose and glucuronate interconversions
ddd01100
Metabolic pathways
ddd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dda3937_04193 (pelB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dda3937_04193 (pelB)
Enzymes [BR:
ddd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dda3937_04193 (pelB)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ADN00345
UniProt:
E0SJQ6
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All DBs
Position
4433852..4434979
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AA seq
375 aa
AA seq
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MKSLITPITAGLLLALSQPLLAATDTGGYAVTAGGNVTGAVSKTATSMQDIVDIIAAARL
DANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDARGVEIKEFTKGITIIGANG
SSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMVRVDDSPNVWVDHNELFAANHECDGT
PDGDTTFEAAVDIKGASDYVTVSYNYIHGVKKVGLDGSSNSDTGRNITYHHNRYNDVNAR
LPLQRGGLVHAYNNLYSNVTSSGLNVRQNGQALIESNWFENAVNPVTSRYDGKNFGTWVL
KNNNITKPADFSTYSITWTADTKAYVNADSWTSTGTFPTVAYSYSPVSAQCVKDNLANYA
GVGKNLATLTSAACK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcactgattaccccgattaccgctggactgctactggcgctcagccaaccgttg
ctggccgccaccgacaccggtggctacgccgttacggcagggggcaacgttaccggtgcc
gtcagcaaaacggcgacgtcgatgcaggatatcgtcgatatcatcgccgcggcccgtctg
gatgctaacggtaaaaaggtgaaaggcggcgcgtacccgctggtcatcacctataccggt
aacgaagattcgctgatcaacgccgcggcggccaatatctgcggccagtggagcaaagac
gcccgcggcgtggaaatcaaggaattcaccaaaggcatcaccatcatcggcgccaacggt
tcttccgccaacttcggtatctggattaagaaatcctccgacgtggtggtgcaaaacatg
cgcatcggttacctgccgggcggcgctaaagatggcgatatggtccgcgttgacgattcg
ccgaacgtctgggttgaccacaacgaactgttcgccgccaaccatgaatgcgacggcacg
ccggacggcgacaccacctttgaggccgcggtggatatcaagggggcttcggattacgtc
accgtatcctacaactacatccacggcgtgaagaaagtcggtctggacggttccagcaac
agcgacaccggtcgcaacatcacctatcaccataaccgctacaacgacgtcaacgcccgc
ctgccgttgcagcgcggcggcctggtgcacgcttacaataacctgtacagcaacgtgacc
agctccggcctgaacgtgcgccagaacggtcaggcgttaatcgaaagcaactggttcgaa
aacgcggtgaacccggtgacgtcccgttatgacggcaagaacttcggcacctgggtgctg
aaaaacaacaacatcaccaaaccggccgacttctctacctacagcatcacctggacggcg
gacaccaaagcttacgtcaacgcggacagctggacctccaccggcactttcccgacggtg
gcctacagctacagcccggtgagcgcacaatgcgtgaaggacaatctggctaactacgcc
ggcgtgggcaagaacctggcaacgctgaccagcgcagcctgtaaataa
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