Oleidesulfovibrio alaskensis: Dde_0004
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Entry
Dde_0004 CDS
T00294
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dde
Oleidesulfovibrio alaskensis
Brite
KEGG Orthology (KO) [BR:
dde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dde03032
]
Dde_0004
03400 DNA repair and recombination proteins [BR:
dde03400
]
Dde_0004
Enzymes [BR:
dde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Dde_0004
DNA replication proteins [BR:
dde03032
]
Prokaryotic type
DNA Topoisomerases
Dde_0004
DNA repair and recombination proteins [BR:
dde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dde_0004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
AAA_23
Pil1
Motif
Other DBs
NCBI-ProteinID:
ABB36805
UniProt:
Q317S1
LinkDB
All DBs
Position
5212..7647
Genome browser
AA seq
811 aa
AA seq
DB search
MSNQVTIEDELKKSYLEYSLSVIIGRAIPDVRDGLKPVHRRIMFAQHELGNGYNRAPKKS
ARVVGDVIGKYHPHGDFAVYDALVRMAQDFSMRDPLVTGQGNFGSIDGDSAAAMRYTEVR
MSRLASEFMADIDKETVEFRPNYDNTLQEPAVLPTKVPNLLLNGSSGIAVGMATNIPPHN
LGELVDGLLLELDSPECTVADLAGLVKGPDFPTGGFCYAGRGLRDAYETGRGTVKIRGRV
EVEERKKGFQSIVIREIPYALNKSSLVEKIAALANERRIEGITDLRDESDRRGIRVVIDL
KRGTIPEIVINQLYKYTPLETSFGINMLAVVGNRPQLLTLKKVFECFLQHRREVIIRRTH
YDLRKAEARAHILEGLRIALDNIDEVVELIRASKTPPEAKERLMQRFSLSEVQAQAILDM
RLQRLTNLEHEKLIEEYRELLKKIEYFKSILENEEVLRGVIRDELKELKETYATPRRTEM
LEDELEGIDIEDLIPDEDVVITLSRRGYIKRTPLDSYQQQRRGGKGIAGVHTGDGDFVQD
FLVTTNHQYLLLFTNKGRMFQLKVHQVPEGSRTAKGMHINNLLPMEENEWVNTALTIREF
TEEKYFLFSTRKGMVKRSSASLYAKARRTGLIAVGLREGDELIMVREVDDNCEVVLTTEK
GIAIRFGCGDVRPMGRSATGVKGIALSQDDSVVACVTVQGGLESEIMTVSRYGYGKRTLI
DRYRVQSRGGKGVINFKVTPKTGEVLGAMTVVSNDQLILLTSTNKIIRIGVKEVRSVGRA
TQGVRLVWLDEGDHVVGFDRVSEQEQEQLDD
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaatcaggttaccatcgaagacgagcttaagaagtcatatcttgagtactcgctg
agtgttattataggccgcgccattcccgatgtgcgcgatggcctgaagcccgtgcaccgg
cgcatcatgttcgcccagcacgagctgggcaacgggtataaccgtgcgccgaaaaaatcg
gcccgtgtggtcggtgacgttatcggtaaataccacccgcatggcgatttcgccgtgtac
gatgcccttgtgcgcatggcacaggatttttccatgcgcgacccgcttgtcaccggtcag
ggcaacttcggttccattgacggcgattccgcggcagccatgcgttataccgaagtgcgc
atgtcgagactcgcttcggaattcatggccgatatagacaaggaaaccgtcgagttccgc
cccaactatgacaataccctgcaggaacccgcggtgctgcccaccaaggtgcccaacctg
ctgcttaacggctcttcgggtattgccgtgggtatggccaccaatattccgccgcacaac
ctcggcgaactggttgacggcctgctgctggaactggactctccggaatgcacggtggct
gatcttgccgggctggtcaaagggcccgactttcccaccggcggcttctgctacgcgggc
agaggactgcgcgatgcgtatgaaacaggacggggcactgttaaaatccgcggccgtgtg
gaagtggaagaacgcaaaaaaggcttccagtccattgtcatccgcgaaataccctatgcg
ctgaacaagtcatcgcttgtcgaaaaaatagccgcgctggccaacgaacgcaggatagaa
ggcataaccgacctgcgtgacgaatctgacagacgcggtatccgcgtggtcatagacctg
aagcgcggcaccattcccgaaatcgtcattaaccagctgtataaatatactccgctggag
acgtctttcggcatcaatatgctggctgtggtgggcaacaggccccagctgcttacgctg
aaaaaggtctttgagtgctttttgcagcaccggcgcgaagtcattatccgcagaacacac
tatgacctgcgcaaggccgaagcccgtgcccatattctggaaggtctgcgtatcgcgctg
gataacatcgacgaagtggtcgaacttatccgtgcatccaaaacaccgccggaagcaaaa
gaacggctcatgcagcggttctcgctttccgaagtgcaggctcaggccattcttgatatg
cgtctgcagcgtcttaccaacctcgaacacgaaaaactgatcgaggaataccgcgagctg
cttaaaaagatcgaatacttcaagtccattctggaaaatgaagaagtgctgcgcggcgtt
atccgtgacgagcttaaagagctcaaggaaacatacgccaccccgcggcggaccgaaatg
ctggaagatgaacttgaaggaatagacatcgaggaccttattcccgacgaggatgtggtc
atcacactgtcgcggcgcgggtacatcaagcgtactccgctggacagctatcagcagcag
cgccgcggcggtaagggcattgccggtgtgcataccggcgatggtgactttgtgcaggat
tttctggtgactacaaaccaccagtacctgctgctgttcaccaacaaagggcgcatgttc
cagcttaaggtgcatcaggtgcccgaaggcagtcgtaccgccaagggaatgcacatcaac
aacctgctgcccatggaagaaaacgaatgggtgaacaccgcgctgactatccgtgaattc
acggaagaaaagtatttccttttctccacccgcaaaggcatggtcaagcgctccagcgca
tcgctgtatgccaaggcccgtcgtacagggcttattgccgtggggctgcgtgaaggagat
gagcttatcatggtgcgcgaggtggatgacaactgcgaagttgttctgaccaccgaaaaa
ggtatcgccatacgcttcggctgcggcgatgtgcgccccatggggcgttccgctaccggc
gtcaaaggcattgcgctgagtcaggacgacagtgtggtggcctgcgttaccgtgcagggc
ggactggaatcggaaataatgaccgtttcgcggtacggatacggtaaacggacacttatc
gatcggtaccgtgtacagagccgcggcggtaaaggtgtcatcaacttcaaggtgacaccc
aagaccggtgaagtgctgggcgccatgaccgtagtatccaacgaccagctgattctgctt
acctccaccaacaagattatccgcataggtgtgaaagaggtccgcagtgtgggccgcgcc
acacagggcgtgcgtcttgtctggctggacgaaggcgaccatgtggtcggctttgacaga
gtttcggagcaggaacaggaacagcttgacgattag
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