Oleidesulfovibrio alaskensis: Dde_0371
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Entry
Dde_0371 CDS
T00294
Name
(GenBank) ABC-type transporter, periplasmic subunit
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dde
Oleidesulfovibrio alaskensis
Pathway
dde02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dde00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dde_0371
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dde02000
]
Dde_0371
Transporters [BR:
dde02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Dde_0371
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABB37172
UniProt:
Q316H4
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All DBs
Position
complement(364717..366348)
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AA seq
543 aa
AA seq
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MFRSQASASARSVLPAPRSYGGTLAAVAFACVLVFSAHGAAAAATTAGQTVTVAMFQRIA
SLDPAHSSLYEPHSIAANVFETLVTVSRNGTVQPAVAESWNVTPDGRRWTFTLHEGRSFH
DGSPLNAYAVEYSFQRLMDPAHPQYTPYPDWKRLLFGQVNSIRALDDNTLEIELDNPYAP
LLHNLATPGASIVSPRSLQEMHDGRTAIPAGSGPFRVASYSPEAVTLIPAAGHTPPPRCN
VRYEYYASSSSALEALLSGRADIVPGLTEQDEKTAQRLGAYTIIRHPQLSVIFLACNGAS
EKMRSPEIRRAVSLSINRNSLATVVLGANGMPATGLLPPEMWAKDHSLPPYEYAPDKARQ
LLLRSGYPQGISLTALQLDASRPFMPSPRLFAVTLKYLMAGAGITLSIETLPPDALRERR
AQGDYDLFINAWVADTADPDNLYSTHLYAGPDNPLHRVHIPELDRLIEESVSTPVRGERA
RAYRRIQRIEREQMPCIPVMHSSLPVILRRGISGMRITTGSYLIFRNTVKTAPADRAQQR
PAP
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
ttgttccggtctcaggcgtcagcaagtgcccgaagcgttctgcccgctccccgttcatac
ggggggactcttgcggccgtggcttttgcctgcgtgctcgtgttttccgctcacggcgca
gcggctgcggcaaccacagccgggcagacagtcaccgtggccatgttccagcgcattgcc
agtctggacccggcacacagcagcctgtacgaaccccacagcatcgctgccaatgttttt
gaaacactggtcaccgtttcgcgcaacggcaccgtgcagcccgctgtggcggaatcgtgg
aatgtgacgcccgacggcaggcgctggacctttaccctgcatgaaggccgcagctttcac
gacggttctcccctgaacgcctatgccgtggaatacagctttcagcggctcatggatccg
gcgcacccgcagtacaccccctatcccgactggaaacggctgctgttcggtcaggtcaat
tccatacgtgctctggatgacaacacgctggaaatagaactggacaacccctatgccccg
ctgctgcataatctggcaacgcccggtgccagcatagtctcgccgcgctcgctgcaggag
atgcacgacggcagaaccgccatccctgccggttcagggccgttccgcgtggcgtcatat
tcgcccgaggcagtcaccctgatacccgccgcagggcataccccgccgccgcgctgcaat
gtccgctacgaatactatgcctccagcagcagcgctctggaagcgctgctctccggcagg
gccgacattgtacccggcctgacagaacaggatgaaaaaacggctcagcggctgggtgcc
tacaccatcatcagacacccgcagctttcggtcatttttctggcctgcaacggtgccagt
gaaaaaatgcgctcccccgaaatccgccgcgccgtatcattgagcatcaacagaaacagt
ctggccaccgtggtgctgggcgccaacggcatgccagccacagggctgctgccgccggaa
atgtgggccaaagaccattcgctgcctccgtacgaatacgcgccggataaagcccggcaa
cttctgcttcgcagcggctacccgcagggcatcagccttacggcgctgcagctcgacgcc
tcacggcctttcatgccttcgccgcggcttttcgccgtcacgctcaaatatctcatggcc
ggagccggcataacgctttccatagaaaccctgccccccgatgctctgcgggaacgccgt
gcacagggcgactatgatctgttcatcaacgcatgggttgccgatacggcagaccccgac
aatctgtacagcacgcacctgtatgcaggacctgacaacccgctgcacagggtacacata
cccgagctggaccggctgatagaagaaagtgtttccacccccgtacgcggcgaaagggcg
cgggcctaccgccgcatacagcgtatagaacgtgaacagatgccgtgcatacccgtcatg
cacagcagcctgccggtcatactgcgccgcggaatttccggcatgcgcattaccacgggc
tcgtacctgatctttcgcaacaccgtaaaaacagcgcctgcagaccgcgctcagcaacgg
ccggcaccatga
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