Oleidesulfovibrio alaskensis: Dde_1774
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Entry
Dde_1774 CDS
T00294
Name
(GenBank) UPF0042 nucleotide-binding protein yhbJ
KO
K06958
RNase adapter protein RapZ
Organism
dde
Oleidesulfovibrio alaskensis
Brite
KEGG Orthology (KO) [BR:
dde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dde03019
]
Dde_1774
Messenger RNA biogenesis [BR:
dde03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Dde_1774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_33
AAA_18
AAA_16
AAA_22
AAA_29
ABC_tran
RsgA_GTPase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABB38571
UniProt:
Q310S5
LinkDB
All DBs
Position
1827736..1828620
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AA seq
294 aa
AA seq
DB search
MKKSESLPVLIVTGLSGAGKSTVLNVFEDLRFFTIDGLPVGVVADLLEHLARDAMGRYRG
VVLGMDLRQFDFLDEFEGALMRLEKMGVSPRIIYLEADSDTLVRRFATTRRPHPLEGGDL
GLEAAVEHERNLLAPVRERADLILDTSEFSIHDLRRIVQKKWSSLGGSLRSLRVNLITFG
FKYGVPSDADMVFDLRFLPNPYFDAKLKALSGKDPEIQQFVLGCEQGKTFFKRFLDFLLF
LLPQYEAEGRYRITLAIGCTGGRHRSVSTAEALRDALKKSDYAVSLEHRHIDLG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagagtgaaagtctgccggttcttatagtcacaggactttccggcgcgggcaaa
agcacggtgctcaatgtattcgaggacttgcgcttttttaccatagacgggctgccggtg
ggggtagtggccgacctgttggaacatcttgcacgtgatgccatggggcgctaccgcggc
gtggtgctgggcatggacctgcgccagttcgattttctggatgaattcgaaggcgcactt
atgcggctggaaaagatgggggtttctccccgcatcatctatctggaagccgacagtgat
actctggtacggcgttttgccaccacacgcagacctcatcctctggaaggcggcgacctg
gggctggaggccgccgttgaacatgaacggaatctgctggctccggtgcgtgaacgtgca
gaccttattctcgatacctcagaattctccattcacgacctgcggcgcattgtgcaaaaa
aaatggagttcgcttggaggcagcttgagaagtctgcgcgtcaacctgattaccttcggg
ttcaaatacggtgtcccttccgacgccgacatggttttcgacctgcgctttctgcccaat
ccgtacttcgacgcaaaattaaaggcgctttcaggtaaagaccctgaaatacagcagttt
gttctgggttgcgagcaaggcaagactttctttaaacgttttttagactttcttctcttc
ctgcttcctcagtatgaggcggaaggccgctaccggataacgctggccatcggctgtacc
ggcggcagacaccggtctgtttccacagccgaagcattgcgggacgctttgaaaaagtcc
gattatgcagtatccttggaacaccggcatatcgatctgggctga
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