Oleidesulfovibrio alaskensis: Dde_1922
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Entry
Dde_1922 CDS
T00294
Name
(GenBank) UvrD/REP helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dde
Oleidesulfovibrio alaskensis
Pathway
dde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dde_1922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dde03400
]
Dde_1922
Enzymes [BR:
dde01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Dde_1922
DNA repair and recombination proteins [BR:
dde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dde_1922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
OB_YrrC
UvrD-helicase
T2SSE
RsgA_GTPase
HHH_5
Herpes_Helicase
PIF1
SLFN-g3_helicase
DUF6079_1st
PMT2_N
TraI_hel_assoc_N
AAA_16
PhoH
Motif
Other DBs
NCBI-ProteinID:
ABB38719
UniProt:
Q310C7
LinkDB
All DBs
Position
complement(1974891..1977119)
Genome browser
AA seq
742 aa
AA seq
DB search
MPKRNESNPARLRGRIERVYYAGPKFSAGRLLTPTGEEVQFAGNLFARENQPVVLLGSWA
THPKYGRQFKVDGMEHDLELDPEGLIHYLANHPEIKGIGPAKARLIVESFGDAFEETLLN
DPERIALKARLPLDAARRLRDEWLKNRSVNAVMAWLSAFGLTHHQVTTLVERLGGNCLDI
LKEDPYILIREIRGFGFKKVDKIARKLGTPKDHTPRIRAGLNFCVREALDNGHCWIEYED
LVDQANLLLVMDALDSRVRIESALDALIEEQALACDSHGGRFVVALPEIVRMERELALLF
GQAETPNPHFQSVKKLDALIRRCASTLNEKQLDAVRSALQHSISLISGGAGSGKSYTISV
INTICEESDLEVVLAAPTGKAAKRLEEVSGRSGTTIHRLLGYDGKGFSRSKENPIDADVL
VVDEFSMVDVPLAWHLFEAVDLSRTTVLLVGDHNQLPPVGPGNILRDLIQTRAIPTVILD
KVVRQAGVLKENCTAVLKGEVRKTSEASVSGCRDWYLVDQFTDPMAARSFLLELFQERLD
TLGFDIIKDVQVLTPTHKGPLGTKELNEELQRLIQRKLWNTEVPPVAMGRRAPFLKHDKV
IQTRNNYDLNVMNGAIGYVVDVLANGTLVIDFDGMPVELEKGSPDLQDLQLAYALTIHKT
QGSEFPCAVVVIHKAHSFMHHRNLLYTGVTRARRTAIVLGDHWGIQNCAKRCQVDDRRTF
LPLFLDAAQHADADSARVAEAE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagaaatgagagtaacccggcgcgactccggggaagaatagagcgcgtttac
tatgccggacccaagttctccgcaggccgactgctcaccccgaccggtgaggaagtccag
ttcgcgggcaatttgttcgcccgggaaaatcagcctgtggtcctgctcgggtcgtgggcc
acccatcccaaatacggccgtcagttcaaggtcgacgggatggagcacgacctcgaactc
gatccggaggggctgatccactatctggccaaccatccggagatcaagggcattggtccg
gccaaggccagattgatcgtcgagagtttcggcgacgcctttgaagaaacccttctgaat
gaccccgagcgcatcgcgctcaaagctcggctgcccttggatgctgcccggcggctgcgt
gacgaatggttgaagaaccgcagcgtcaacgccgtcatggcctggttgtcggcattcgga
ctgacccatcatcaggtcaccactctggtcgaaagactcggcggcaactgcctcgatatt
ctgaaggaagacccgtacatcctcattcgggagatccggggattcggcttcaagaaggtc
gataagatcgcccgcaagcttggcacccccaaggaccacacccctcgtatccgcgctggg
ttgaatttctgcgtccgtgaagccctggacaatggtcactgctggatcgaatacgaggat
ctggtggaccaggccaatctgctgctggtcatggatgccctggacagccgggtccgcatc
gagagcgccctcgacgcgctcatcgaagaacaggcgcttgcctgcgattcccacggcgga
cgtttcgtggtcgctctgccggagatcgtccgcatggagcgggagctggccttgttgttc
ggccaggccgaaacaccgaatcctcatttccagtccgtcaagaaactcgatgccctgatt
cggcgctgcgcatcaacgctgaacgagaagcagctcgacgcggtccgctcggccctccag
cacagcatcagcctgatttcgggtggagccggttcgggcaagagctacaccatttcggtc
atcaacaccatctgcgaggagagcgacctggaggtcgtgctcgccgcgccgaccggcaag
gccgccaagcgcctggaggaagtcagcggtcgcagcggcaccaccattcaccgtctgctc
ggctatgacggcaagggtttctcgcgcagcaaggagaatcccatcgatgccgacgtcttg
gtggtcgacgagttttcgatggtcgacgtgccgctggcctggcacctgttcgaggcggtc
gatttgtcgcggaccacggtgctgctggtcggggaccacaaccagcttccgccggtggga
cccggaaacatactgcgcgatctgatccagacacgcgccatccccacggtcatcctcgac
aaggtcgtgcgccaggctggcgtcctcaaggagaactgcaccgccgttctcaagggcgag
gtgcgcaagaccagcgaggcgtcggtatccggatgccgggattggtacctggtagatcag
ttcaccgatccgatggctgcacgctcgttcctgctggagctgtttcaggagcggctcgac
accctgggattcgacatcatcaaggacgtgcaggtgctgacgccgacccacaagggaccg
ctcggcaccaaggaactgaacgaggaactgcagcggctcatccagcgcaagctctggaac
accgaggtgccgccggtcgccatgggccgccgcgccccgtttctcaagcacgacaaggtc
atccagacccggaacaactacgatctgaacgtgatgaacggggccatcggctatgtggtc
gatgtcctcgcgaacggcaccctggtcatcgacttcgacggcatgccggtggagctggag
aagggttcgcccgacctgcaggatctgcagctcgcctatgcgctcaccatccacaaaacc
cagggttccgagttcccctgcgccgtcgtggtgatccacaaggcgcattccttcatgcat
caccgcaacctgctctacaccggggtgacccgcgcccggcgcaccgccattgtcctgggc
gaccattggggcatccagaactgcgccaagcgttgccaggtggatgaccgccggaccttc
ctgcccctgtttctggacgccgcccagcacgcggatgccgattccgcccgtgtcgcggag
gccgaatga
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