Oleidesulfovibrio alaskensis: Dde_1960
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Entry
Dde_1960 CDS
T00294
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
dde
Oleidesulfovibrio alaskensis
Pathway
dde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dde_1960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dde02000
]
Dde_1960
Enzymes [BR:
dde01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Dde_1960
Transporters [BR:
dde02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Dde_1960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
AAA_16
Zeta_toxin
AAA_24
AAA_25
RsgA_GTPase
Cytidylate_kin
AAA_29
Septin
DUF3584
MMR_HSR1
ATP-synt_ab
AAA_5
AAA_14
nSTAND1
DUF87
SRP54
AAA_19
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ABB38757
UniProt:
Q30ZY9
LinkDB
All DBs
Position
2007836..2009644
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AA seq
602 aa
AA seq
DB search
MSTAQREQHTKKSEGRILFRRILGYFSSYKLHITIATLGMLSVAACTGAAAYLVKPALDD
IFISKNETMLLLVPFAYIVIITIKGLGRYVQNYFMRYCGLMVLERLRNELYRKIICLPTR
FYEENQVGMLMSRIINDVMLIRASLPSVVMIVRQVITMCCLIGVVFYQDWFLAIWAVLVL
PLAAFPFIYFGRKLRKLSRRNQNKLSDISIFLQEIFSGIRVVKAFATEDKEAARFKQENN
RLVKIAIKETVFSELSSPVMELIGAVGIGLVIWYGGKQVIDGVSTPGTFFSFVAGLVMLY
DPVKSLNSANMDIQRALAGAERVFEILDSKDIVVEKDGTVPFSGSFEEIRFENLTFHYEG
CPAPVLDNINLTVRQGERVAIVGPSGAGKTTFVNLIPRFYEQTEGRILLNGTDIREYTLA
TLRRNVAMVSQDSFLFNIPVMENIAYGMESTSEEAVYEAARAAYAHDFILQLKDGYQTVI
GERGVKLSGGQKQRLTIARAILKDAPLLILDEATSALDSESERIVQKALENLMAHRTSIV
IAHRLSTILGADRILVMEKGRIVSQGRHEDLLGSCPLYTRLYNMQFQTEHTTEDNGCALP
QA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagcacagcgagagcagcacacaaaaaaatcggaagggcgcatactcttccgc
cggatactcggttacttcagttcctacaagcttcatataaccattgccacgctgggcatg
ctttcagtggctgcgtgcaccggtgctgccgcgtatctggtcaaaccggcgctggacgac
atattcatcagcaaaaacgaaaccatgctgctgcttgtgcccttcgcctatattgtcatc
ataaccatcaagggcctggggcgctatgttcagaactatttcatgcgctactgcgggctc
atggtgcttgaacgcctgcgtaacgaactgtaccggaaaataatctgccttccgacccgc
ttttacgaagaaaatcaggtcggcatgctgatgtccagaataataaacgatgtcatgctg
atacgggcaagcctgccgtctgtcgtcatgattgtacgacaggtgatcaccatgtgctgc
ctcatcggggtggtgttctatcaggactggtttcttgccatatgggctgtgctggtactg
ccgcttgcggcctttccgttcatctacttcggccgtaaactgcgtaagctgagccggcgc
aaccagaacaaactttccgacatctctatctttctgcaggaaattttcagcggcatccgg
gtagtcaaagcctttgccaccgaagacaaggaagctgcgcgcttcaagcaggaaaacaac
cgccttgtcaaaatagccattaaagaaaccgtcttcagcgaactgtcttcgcctgtgatg
gaactgataggtgcggtggggataggacttgtcatctggtacggcggcaaacaggtgata
gacggcgtttccacaccgggaacgtttttctcgttcgttgccggactggtcatgttatac
gaccctgtaaaaagcctgaactcggcaaacatggacatccagcgggctctggccggtgct
gaaagggtatttgaaatccttgattccaaagatattgttgtagaaaaagacggcaccgta
cctttttccggcagctttgaagaaattcggtttgaaaacctgacgtttcactacgaaggc
tgtcccgcccccgtgctggacaacataaacctgaccgtcagacaaggagaacgggttgcc
attgttggccccagcggggccggaaaaacgacctttgtcaacctgataccgcgtttttat
gaacagacagagggccggattctgctgaacggaacagatatcagagaatacaccctggcc
acactgcgtcgtaacgtggccatggtgtcgcaggattctttcctttttaatattcctgta
atggaaaacattgcctacggcatggaaagcacctcggaagaagcagtttacgaagcagcc
cgtgcggcatacgcacacgatttcatcctgcagcttaaagacgggtaccagaccgtcatc
ggcgaaagaggcgtaaagctttccggcgggcagaaacagcggcttaccatcgcacgggcg
attcttaaggacgctccgctgctgattctggatgaagcaaccagcgcacttgattccgag
tcggaacgcattgtccagaaagcactggaaaatctgatggcacaccggacgagcatagtc
attgcgcatcgtctttccaccattctcggagcagacagaattctggtgatggagaagggc
aggatagtgtcgcagggacgtcatgaagacctgctgggatcgtgcccgctgtacacacgt
ctgtacaatatgcagtttcagacagagcatacaaccgaagacaacggttgtgcactgccg
caggcataa
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