Oleidesulfovibrio alaskensis: Dde_2116
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Entry
Dde_2116 CDS
T00294
Name
(GenBank) putative RNA polymerase, sigma 70 family subunit
KO
K03089
RNA polymerase sigma-32 factor
Organism
dde
Oleidesulfovibrio alaskensis
Brite
KEGG Orthology (KO) [BR:
dde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dde03021
]
Dde_2116
Transcription machinery [BR:
dde03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dde_2116
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Sigma70_r3
Emfourin
Motif
Other DBs
NCBI-ProteinID:
ABB38913
UniProt:
Q30ZI3
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All DBs
Position
2165550..2166632
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AA seq
360 aa
AA seq
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MTPAKDTVKKHTAAAATDSNAAEDSAAEVLTGDDETTYDIEIDQEEDDEDIDIDEGDVID
VSDTDLPAPLPPGNKPTRDSLHLYLREISRFPMLKPDEEFELARRVQLHNDSDAAFRLVS
SHLRLVVKIAMDFQRRWMQNVLDLIQEGNVGLMRAVNKFDPDKGIKFSYYAAFWIKAYIL
KFIMDNWRLVKIGTTQAQRKLFYNLNKERQKLIAQGYDPDAAMLSERLDVTTEQVVEMEQ
RLDASDMSLDVQVGDENGSASRMDFLPALGPGIEDTLANNEIAAMVQERIRDIVPLLNDK
ELDILNSRLLSEDPVTLREIGEKYDITRERVRQIEARLLQKIRDHLFKEIKDFSSDWITR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgactcccgcaaaagataccgtaaaaaagcataccgcagccgcagccacggacagcaac
gccgcagaagattccgcggcggaagtcctgaccggagacgacgaaacgacctatgatatc
gaaattgatcaggaagaagacgatgaagatatcgatatcgacgagggcgatgtcatcgac
gtcagcgatacggacctgcctgcccccctgccccccggcaacaagcccacgcgcgattcg
ctgcatctgtacctgcgcgaaataagccgttttcccatgctcaagcccgacgaagagttt
gagcttgcacggcgggtacagctgcacaacgacagtgatgcggccttccggcttgtatca
tcgcatctgcggcttgtggtcaagattgccatggactttcagcgccgctggatgcagaac
gtgctcgacctgatacaggaaggcaacgtggggctgatgcgtgccgtcaacaagtttgac
ccggacaagggcataaaattttcatactacgccgctttctggataaaggcgtatatcctc
aagttcatcatggacaactggcggctggtcaaaataggcaccacgcaggcccagcggaag
cttttctacaaccttaacaaagaacgccagaagcttatagcgcaggggtacgaccccgat
gcggccatgctttccgagcggctggacgtcaccaccgagcaggtggtggaaatggagcag
cggcttgacgcttcggacatgtcgcttgatgtgcaggtcggcgacgaaaacggctcggct
tcgcgcatggactttctgccggcgctcggtcccggcattgaagacaccctcgccaacaac
gaaatcgcggcaatggtgcaggaacgcatccgggatatcgtccccctgctcaatgacaag
gagctggacatactcaactcgcgcctgctttcggaagacccggtcaccctgcgcgaaata
ggcgaaaagtatgatataacccgcgaacgggtccgccagatagaagcccgtttgctccag
aagatccgtgaccacctgttcaaggaaatcaaggatttctcttcggactggatcaccaga
tag
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