Oleidesulfovibrio alaskensis: Dde_2378
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Entry
Dde_2378 CDS
T00294
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
dde
Oleidesulfovibrio alaskensis
Brite
KEGG Orthology (KO) [BR:
dde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dde03016
]
Dde_2378
Enzymes [BR:
dde01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Dde_2378
Transfer RNA biogenesis [BR:
dde03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Dde_2378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
ABB39175
UniProt:
Q30YS1
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All DBs
Position
2401832..2403226
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AA seq
464 aa
AA seq
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MHERTFHIMTFGCQMNVNDSDWLARALEARGFTQVPEHEAAIYIINTCSVRDKPEQKVYS
LLGRIRRETKNRRNVTVCVGGCVAQQIGKGFFKRFSQVRLVFGTDGAASAPQAIERLVQE
PHARISLLDFSEEFPERDAGWENGEVPVSAYVNIMQGCNNFCAYCIVPYTRGRQKSRSSA
AVLDECRTLVGNGAREITLLGQNVNSYGLDPHGDGTTFARLLHDVAAIPGLERLRFMTPH
PKDIAGEVIEAFGALKNLCPRVHLPLQSGSDRVLKAMGRKYDMARYMDIVTRLKAVRPDI
QITSDLIVGFPGETEADFEQTLEAMRTVPFVQSFSFIYSDRPGTRAEMLPGKLSREEKTA
RLVRLQEVQNEYSEAALQAMVGKTVMVLFESPSPKSAAGSGTDAQNAAEESGRTASSWQG
RDEHGFILNVHLPAPADLYGKIMPVTVTAARKHSLTGEPAGESC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaagaactttccatataatgacctttggctgccagatgaacgtcaacgattcc
gactggctggcgcgtgccctggaagcccgcggctttacacaggttccggaacatgaggcc
gccatatacatcatcaacacctgttcagtccgcgacaaaccggaacagaaagtctattca
ctgctcggacgcatacgcagagaaacaaaaaacagacggaatgtgaccgtatgtgtgggc
ggctgcgtggcgcagcagataggcaaaggctttttcaagcggttcagtcaggtccggctg
gtattcggcaccgacggggcagccagcgcgccgcaggccatcgaacggctggtgcaggaa
ccgcacgcccgcatcagcctgctggatttttccgaagaatttcccgaacgcgatgcaggg
tgggaaaacggcgaagtacctgtctccgcgtatgtcaatattatgcaggggtgcaacaac
ttctgcgcatactgcattgtgccctacacccgcggcaggcagaaatcgcgcagttcggcc
gccgtgctggacgaatgcagaacgctggtcggcaacggagcgcgggaaatcaccctgctg
gggcagaacgttaattcctacgggcttgatccgcacggcgacgggacaacgtttgcccgg
ctgctgcatgacgtggctgccatacccggtcttgaaaggctgcgtttcatgactccgcat
cccaaagacatagccggtgaagtcattgaagccttcggagcgctgaaaaatctctgcccc
agagtacacctgccgctgcagtccggttctgacagagtgctcaaagccatgggccgcaaa
tacgacatggcccgctacatggacattgttacccgtctgaaagcggtccgccccgacatt
cagataaccagcgacctcatagtcggttttccgggcgaaacggaagcagattttgaacag
acgctggaagccatgcgcaccgtgccctttgttcagagcttttcattcatctattccgac
aggcccggcacacgggctgagatgctgcccggcaagctttcgcgcgaagaaaaaaccgca
cggcttgtcaggctgcaggaagtgcagaatgaatacagtgaagcagcgctgcaggctatg
gtcggcaaaacagtcatggtgctgtttgaaagccccagccccaaaagtgcagccggttcc
ggtacggacgcacagaatgcagcggaagaatcgggccggacggcatcctcatggcaggga
cgggacgagcacggctttatactgaacgtgcacctgcccgcacccgcagacctgtacggc
aaaataatgcccgtcacagtgaccgccgcacgcaaacactcgctgacgggcgaacccgcg
ggggaatcatgctga
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