Oleidesulfovibrio alaskensis: Dde_2715
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Entry
Dde_2715 CDS
T00294
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dde
Oleidesulfovibrio alaskensis
Pathway
dde03410
Base excision repair
dde03430
Mismatch repair
dde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dde_2715
03430 Mismatch repair
Dde_2715
03440 Homologous recombination
Dde_2715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dde03400
]
Dde_2715
DNA repair and recombination proteins [BR:
dde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Dde_2715
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Dde_2715
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Dde_2715
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ABB39511
UniProt:
Q30XT5
LinkDB
All DBs
Position
complement(2716779..2718485)
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AA seq
568 aa
AA seq
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MAKNWIPRGTEPLPGETALWAERLGVSELLVQLLWTRGLHTPEDMDVYLSPGLRHLAPPD
CWPGLAQAAAVLDDGLAQGLPFAVWGDYDVDGVTSVALVKSFLAAHGIAARHHIPNRFEE
GYGMNVAWVERLAQEGVRLLLTVDCGISDHESVARARELGMTVVVSDHHLPGESLPQAHA
ICNPRLADCPCPALAGVGVAFFLMAALNSRLAQRTGVKADIRPLLDLVALGTIADVVDLS
GQNRILVKNGLLVMTEAGRPGIAALKEVSGYSVSASLGAGQVAFGLAPRINAAGRLGEAD
TALSLLLAPDYAAAAPLAARLDAMNQERKEEEERILEEAREQAAAQQDRMGLVLYAPHWH
AGVIGIVASRIVEEFYRPTLILCDEGGVVKGSGRSTAEFHLHEGLTRCADLLLGFGGHRQ
AAGMSLDHAGVDALRERFHAVVVESCGPHPLTASLKVDAELGFARASDFAMLKELELLQP
FGMGNAEPTFSSPVLEVRGNRRFGKNHMQLELLDPSCGVTLRAKAWRQADNLPRDMRGRK
MRLAYTPRIDRYNGLASVDLRIKDWELF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaaaactggataccgcgcggaacagaacctctgcccggtgaaacggccctgtgg
gctgagcgtctgggtgtttccgaactgctggtgcaactgctgtggacacggggcctgcac
acgcctgaagacatggatgtgtatctgagcccggggctgcgccacctcgccccgccggac
tgctggccgggacttgcacaggcggccgcagtgctggatgacgggctggcgcagggactg
ccgtttgccgtatggggcgactacgacgtggacggcgtgacatccgtcgcgctggttaaa
agttttctggccgcgcacggcatcgcggcgcgccatcatattcccaaccgctttgaagaa
ggctacggcatgaacgtggcatgggtggagcggctggcgcaggagggggtgcgtctgctg
ctgactgtggactgcggcatatccgaccatgaatccgttgcccgtgcccgcgaactggga
atgaccgtggttgtttccgaccaccatctgccgggtgaaagtctgccgcaggcacacgcc
atctgcaacccgcgtctggcggactgcccctgtcctgcgctggcaggagttggcgtggcg
ttttttctcatggctgcactcaacagcaggctggcacagcgcaccggtgtaaaagcggat
atccgccccctgcttgatctggtggcgctgggcaccattgccgatgtggtcgatctttcc
ggtcagaacaggattctggtgaaaaacggcctgctggtaatgactgaagcgggacgcccc
ggcatagccgcgctgaaggaagtgagcggatacagtgtttccgcctctctgggtgccggt
caggttgctttcggactggcaccgcgcatcaatgcggcaggcaggctgggagaagctgat
acggctctttcgctgctgctggcaccggactatgcggcggctgctccgcttgccgcccgt
ctggatgccatgaatcaggaacgcaaagaagaggaagagcgcattctggaggaagccaga
gagcaggccgcagcacagcaggaccggatgggactggtattgtacgcgccccactggcat
gcgggtgtcataggcattgtggcttcacgcattgtggaagagttttaccgccccacgctt
atcctgtgcgatgagggcggcgtggtgaaaggctcgggccgcagcacggcggaatttcat
ctgcacgagggactgacccgctgcgctgacctgctgctgggctttggcggacaccggcag
gcggcaggcatgagtcttgaccacgccggagttgatgccctgcgtgagcgctttcatgcc
gttgtggtcgagtcttgcggtccgcatcctctgacggcgtcgctcaaggtggatgccgag
cttggttttgcgcgggcttccgattttgccatgctcaaggagctggaactgctgcagccg
ttcggcatgggtaacgcggaaccgacattttcgtcacctgtgcttgaagtgcgcggtaac
cgccggttcggcaaaaatcatatgcagctggaactgctggacccgtcatgcggggtgacc
ctgcgggcaaaggcatggcggcaggccgataacctgccacgcgacatgcgcggcagaaaa
atgcgtcttgcctacactccgcgcatcgacagatacaacggccttgcctcggttgatctg
cgcatcaaggactgggaacttttctga
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