Oleidesulfovibrio alaskensis: Dde_2966
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Entry
Dde_2966 CDS
T00294
Name
(GenBank) metal dependent phosphohydrolase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dde
Oleidesulfovibrio alaskensis
Pathway
dde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dde_2966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dde03019
]
Dde_2966
Enzymes [BR:
dde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Dde_2966
Messenger RNA biogenesis [BR:
dde03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Dde_2966
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_NucTran2_2
PolyA_pol_RNAbd
CNV-Replicase_N
HIM1
Motif
Other DBs
NCBI-ProteinID:
ABB39760
UniProt:
Q30X36
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All DBs
Position
2949505..2950827
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AA seq
440 aa
AA seq
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MTQPFKDAIGICKAIMRNGYDAYVVNTQLQSEILDQDCLEIDIACEPGYVELGKIFPGLE
MSGEDGVVGTLREGGTLFRFYHTDTDDSSHPEATLARVTPTMLRRLEAKGTLPASLACPF
IPSSAETYQGFDDFSKGDIRFEGVPDETLRRSYVLGVRAMRIAANFDLPIEPNSWMAIVR
SASRILDYVPVTEIMDEWRKVEAENMYKFVQLMFDSMLLHGLIPELAALSRIRHLRTPEA
GEETVLDHTIECMRRYPEELPFDWLGTVATMFHDVGKLYAAEYYNGKWTFYQHHRIGAKV
TRKILRRLHFLPEDVDLICHLVRNHMRFHFMLTDKGIRRFKALDEYPRLIEMARADIKAR
DGNYTHFNHNMKYLERAETPEQMLEPLLNGNEIMEFTGLKPGPYVGVIRDALLKAQVTGE
VTSMEEAIEYVKTYSERAPR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcccttcaaggatgccataggcatctgcaaggccataatgcgcaacgggtac
gacgcctacgtggtcaacacccagctgcagtccgaaattctcgatcaggactgccttgaa
atagacatcgcgtgcgagcccggttatgtggagctcggcaagatttttcccggtcttgaa
atgtccggcgaagacggcgtggtgggcaccctgcgcgaagggggaacccttttccgcttc
taccacaccgacactgatgattcttcgcatccggaagccacacttgcccgtgtgaccccc
accatgctgcgccgccttgaggcaaaaggtacgctgcccgcctcgctggcctgtccgttc
attcccagctcggcggaaacatatcagggctttgacgatttttccaagggcgacatacgc
ttcgagggcgtgcccgacgaaaccctgcgccgttcttacgtactgggtgtgcgcgccatg
cgcatagccgccaacttcgacctgcccatcgaacccaactcgtggatggccatagtacgc
agtgcaagccgcattctagactatgtgccggtaacggaaatcatggacgaatggcgcaag
gtggaagccgaaaacatgtacaagttcgtccagctgatgtttgactccatgctgctgcac
ggactcattcccgaactggccgcactgtcgcgcatccgccacctgcgcacgcccgaggca
ggcgaagagaccgtgctcgaccacaccatagaatgcatgcgccgctaccccgaagaactg
ccctttgactggctgggcaccgtggccaccatgttccacgatgtgggcaaactgtatgcc
gccgaatactacaacggcaaatggacattctatcagcaccaccgcatcggtgccaaagtc
acacgcaaaattctgcgcaggctgcactttctgccggaagatgtcgaccttatctgccat
ctggtgcgcaaccacatgcgtttccatttcatgctcaccgacaagggcatacgccggttc
aaggcgctggatgaatacccgcgcctgattgaaatggccagagccgacattaaagcccgc
gacggcaactacacgcacttcaaccacaatatgaagtaccttgaacgtgccgaaaccccc
gagcagatgctggaaccgctgctgaacggcaacgaaatcatggaattcaccggtctgaag
cccggcccctatgtgggggttatccgcgatgcgctgcttaaagcgcaggttacgggtgag
gtgaccagcatggaagaagccatcgagtacgtcaaaacgtacagtgaacgcgctccccga
taa
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