Oleidesulfovibrio alaskensis: Dde_3165
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Entry
Dde_3165 CDS
T00294
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dde
Oleidesulfovibrio alaskensis
Brite
KEGG Orthology (KO) [BR:
dde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dde03016
]
Dde_3165
Enzymes [BR:
dde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Dde_3165
Transfer RNA biogenesis [BR:
dde03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dde_3165
Prokaryotic type
Dde_3165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ABB39959
UniProt:
Q30WI7
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All DBs
Position
3152976..3153905
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AA seq
309 aa
AA seq
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MADSKLAQQHGVLVLNKPKGPTSAHCIARIKRLGQKKIGHAGTLDPMAQGVLLVLLGQCT
KISGYLMEGGEKIYSGTLELGRTTDTWDDEGETLSTADWTHVTEEDVVRAVDLWTGSSEQ
QVPAYSAAKHKGQPLYKLAREGKETPVKTRRIEISQAETLAVELPFVRFRVHCSSGTYIR
SLAHSLGNRLGCGAVLTELIREYSHPFSLDEAHDLDDVLAEPAELAGRVIPLDKALPHWP
KLRLSAADEARVKNGMPHPYDPAEMASMPFTEGIRAVLLDPAGDPLALAETAYRNQVPVW
TVLRGLWNT
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcgaaacttgcacagcagcacggggtactggtacttaacaaacctaaaggc
cccacatcggctcactgcatcgccagaatcaaacggctggggcagaaaaaaataggccac
gccggcacgctggaccccatggctcagggcgtgctgctggtgctgctgggccagtgcacc
aagatttccggctatctgatggaaggcggagaaaaaatatactccggcacgctggaactg
ggacgcaccacagacacgtgggacgacgaaggcgaaacactttccacagcagactggacg
cacgtaaccgaagaggacgtggtccgcgctgtcgacttgtggacaggttcgtcggaacag
caggttccggcatattccgcggccaagcacaaggggcagcccctgtacaagctggcacgc
gaaggtaaggaaacgcctgtcaaaacaaggcgtatagaaatttcacaggcggaaacgctc
gctgttgagctgccgtttgtgcgcttccgggttcattgcagttcgggcacctatatacga
tccctggcccacagcttggggaaccgtctagggtgcggcgctgtgctgaccgaactcatc
cgggagtacagccacccgttctcgctggacgaagcccatgatctggacgacgttctggca
gaaccggcggaacttgccggcagggtcataccgctggacaaggcattgccgcactggccc
aagctgcgcctgagcgcagctgacgaagcccgtgtgaaaaacggcatgccccatccgtat
gatccggcagaaatggccagcatgccttttaccgaaggtatcagagccgtactgctcgac
ccggccggtgacccgctggctctggcggaaacagcctacagaaatcaggtgcccgtctgg
acggttctgcgggggctgtggaatacataa
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