Oleidesulfovibrio alaskensis: Dde_3227
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Entry
Dde_3227 CDS
T00294
Name
(GenBank) sigma54 specific transcriptional activator, PspF, Fis family
KO
K03974
psp operon transcriptional activator
Organism
dde
Oleidesulfovibrio alaskensis
Brite
KEGG Orthology (KO) [BR:
dde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dde03000
]
Dde_3227
Transcription factors [BR:
dde03000
]
Prokaryotic type
Other transcription factors
Others
Dde_3227
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Paralog
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA
Motif
Other DBs
NCBI-ProteinID:
ABB40021
UniProt:
Q30WC5
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All DBs
Position
3215833..3216921
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AA seq
362 aa
AA seq
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MSRRTQPHAAHVEALGSSDVFLAFQEHVSRAAKVERPVLLLGERGTGKELAATRLHYLSS
RWQGPLVTLNCAAISPALMESELFGHESGAFTGAERQRRGRFEQAHGGTLFLDEIGNMPP
AMQEKILRVVEYGVFERVGGSHAVETDVRIVAATNVDLARMADAGRFKRDLLDRLAFEVL
TLPPLRERGEDIMLLARRFAASMAAELGRPETPRFTPHAEAALKNHSWPGNVRELKNTVE
RAVFHSDGALIDTIETDPFVSPWRQGLAAPYPEHHGTENPDPPSQRPQAPCPQGDTAPFP
SSVPDLSIPLQRAAHALEQEYLRAALERTRHNQRQAAELLGLTYHQFRGLFRKHKQDIVA
DP
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcgtacacagccacatgccgcccacgtggaagcgctgggcagttccgatgtg
tttctggcatttcaggaacatgtatcccgtgcggcaaaggtggaaaggcccgtgctgctg
ctgggcgaacgcggcaccggcaaggaactggccgccacccggctgcactacctttcatcg
cgctggcaggggccgctggtcacattgaactgtgcggccatatcacctgccctcatggaa
tcggaactcttcggccacgaaagcggtgccttcaccggcgccgaaagacagcgccggggc
aggttcgagcaggcgcacggcggcaccctgtttctggacgagataggcaacatgccgccg
gccatgcaggaaaaaattctgcgcgttgtcgaatacggcgttttcgagcgcgtcggcggt
tcacacgccgtggagacagacgtgcgcatagtggccgccaccaatgttgatctggcgcgc
atggccgatgcaggccggttcaaacgggatctgctggacaggctggcatttgaggtgctc
acgctgcccccgctgcgggaacggggtgaagacattatgctgctggcacggcgttttgcc
gcttccatggccgcggaactgggcagaccggaaacgccgcggtttaccccgcacgccgaa
gccgccctgaaaaatcacagctggcccggcaacgtgcgcgaactgaaaaacacagtcgag
cgcgccgtgtttcactctgacggcgctctcatagataccatagaaacagacccttttgtc
tctccctggcggcaggggcttgcggcaccatatccggaacaccacggcacagaaaatccg
gaccctccttcacaacgtccgcaggcgccctgcccgcaaggggacaccgcgccctttcct
tcttccgtgcccgatctttccataccgctgcagcgggccgcccatgcactggagcaggaa
tacctgcgcgccgcgctggaacgcacacgccacaatcagcggcaggccgcagagctgctg
ggcctgacctaccaccagtttcgcgggttgttccgcaaacataaacaggatattgtcgct
gacccgtaa
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