Dechloromonas denitrificans: KI615_01990
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Entry
KI615_01990 CDS
T08301
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dden
Dechloromonas denitrificans
Pathway
dden03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dden00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KI615_01990 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dden03021
]
KI615_01990 (rpoA)
03400 DNA repair and recombination proteins [BR:
dden03400
]
KI615_01990 (rpoA)
Enzymes [BR:
dden01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KI615_01990 (rpoA)
Transcription machinery [BR:
dden03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KI615_01990 (rpoA)
DNA repair and recombination proteins [BR:
dden03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KI615_01990 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UCV08323
LinkDB
All DBs
Position
395643..396617
Genome browser
AA seq
324 aa
AA seq
DB search
MQSSGLLKPRIIDVQSVSPVQAKVVMEPFERGYGHTLGNALRRILLSSMPGYAPTEVGIE
GVLHEYSTVDGVQEDVVDILLNLKGVVFKLHGRDVVNLNLVKEGEGPVRAGDIELPHDAE
IINPEHVIAHLSPGGKLSMEIKVEKGRGYVPGNVRNLGDAKTIGKLVLDASFSPIRRVAY
AVESARVEQRTDLDKLIVDIETNGVVEPEEAIRYAARVLMEQLSVFADLEGTAPVTEASK
PAQVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKE
VLAARGLTLGMKLENWPPAGLEKV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcagtggacttctgaaaccccgcatcattgatgtgcagagcgtttcgcccgtg
caagccaaggttgtgatggagccgtttgaacgcggttacggtcacaccttgggaaacgcc
ctgcgacgcattctgctgtcttcgatgccgggttatgcgccgaccgaagtcggaatcgaa
ggcgtgctccatgagtactccaccgttgatggtgttcaggaggatgtcgtcgatatcctt
ctcaacctgaagggtgtcgtattcaagctgcacggccgcgatgtcgtgaatctcaatctg
gtcaaggaaggtgaaggtccggttcgtgctggtgatatcgaattgccgcacgatgcggaa
atcatcaaccccgaacatgtgatcgctcacctgtctcccggcggcaagctgtccatggag
atcaaggtcgaaaaaggtcgcggctatgtgccgggcaacgtccgtaatctgggcgatgcc
aagacgatcggtaaattggttctggatgcttcgttcagcccgattcgccgcgtcgcctac
gctgtggaaagcgctcgcgtcgagcagcggaccgacctcgacaagctgatcgtcgatatt
gaaaccaacggcgtcgtcgagccggaagaggccattcgctacgcggcacgcgtgctgatg
gaacaactctccgtctttgccgacctggaaggtactgcaccggttaccgaggcctccaag
ccggcccaggttgatccggttctgctccgcccggttgatgatctcgaattgaccgttcgt
tctgcgaactgtctcaaggctgagaacatttactacatcggcgatctgattcagcgcacc
gagaatgaacttctcaagaccccgaatctgggtcgcaagtcgttgaatgagatcaaggaa
gtgttggccgcgcgcggcttgactctgggcatgaaattggaaaattggccgccggccggt
ctggaaaaagtctaa
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