Dechloromonas denitrificans: KI615_05400
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Entry
KI615_05400 CDS
T08301
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
dden
Dechloromonas denitrificans
Pathway
dden02020
Two-component system
dden02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dden00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KI615_05400
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KI615_05400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dden03021
]
KI615_05400
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dden02035
]
KI615_05400
Transcription machinery [BR:
dden03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KI615_05400
Bacterial motility proteins [BR:
dden02035
]
Flagellar system
Flagellar assembly proteins
Stator
KI615_05400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HNH_repeat
HTH_23
DUF6657
Ribosomal_L50
Motif
Other DBs
NCBI-ProteinID:
UCV08963
LinkDB
All DBs
Position
1116195..1116899
Genome browser
AA seq
234 aa
AA seq
DB search
MGYSELVNAPAVGSAAEEQRQLLACVPLVKRIVRQLNAQVTAIMSREDMEQIGLVGLLDA
LRRYGMPDEKFGAYAAVRVRGAILDELRRQDWRPRAVRQKNHRLRDEVRELTRRLGREPS
EAEILATLQLTPEGYQEYQLADCAEEFASFDELFTEMGNLPSDSQTPEARTIDRRTVEQA
LQVLDEREQRVVQLYYEFELGLKEIAAVLGLTEARVCQINKGALRKMKDFLQQP
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgggttattccgagctggtcaatgcgcctgccgtcggcagcgccgcggaagagcagcgg
caattgctggcctgcgtgccgctggtcaagcgcatcgtgcgccagctcaatgcccaggtg
acggcgatcatgagccgcgaggacatggagcagatcggcctggtcggcctgctcgacgcc
ttgcgccgctacgggatgccggacgagaaattcggtgcctatgccgcggtccgggtgcgg
ggcgccattctcgacgaattgcgccgtcaggactggcggccgcgcgcggtgcgccagaag
aaccaccggctgcgcgacgaggtgcgcgaattgacccgccggctcggtcgcgagccgagc
gaggcggaaatcctcgccaccttgcagctgaccccggagggctaccaggagtaccagctg
gccgactgtgccgaagagttcgccagcttcgacgaactgttcaccgagatgggcaacctg
ccctccgacagccagacgccggaggcccggacgattgaccggcggaccgtcgagcaggcg
ctgcaagtgctcgacgagcgcgaacagcgggtggtccagctgtattacgaattcgaactc
ggcctcaaggaaatcgccgccgtactgggcctgaccgaggcgcgggtatgccagatcaac
aagggggcgttgcggaagatgaaagacttcctgcaacagccttga
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