Dechloromonas denitrificans: KI615_05710
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Entry
KI615_05710 CDS
T08301
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
dden
Dechloromonas denitrificans
Pathway
dden02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dden00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KI615_05710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dden02022
]
KI615_05710
02035 Bacterial motility proteins [BR:
dden02035
]
KI615_05710
Two-component system [BR:
dden02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
KI615_05710
Bacterial motility proteins [BR:
dden02035
]
Pilus system
Twitching motility proteins
KI615_05710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_50
AAA_5
HTH_30
AAA_16
HTH_28
PG_1098_Fer
Motif
Other DBs
NCBI-ProteinID:
UCV09024
LinkDB
All DBs
Position
1176438..1177790
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AA seq
450 aa
AA seq
DB search
MSVARTERRPRGELTRILVVDDEADIRELIDLTLARMGLAAECVGSVAEARAALSAGSFQ
LCLTDMRLPDGEGLDIVRHIGEHHAQTPVAVITAFGSAENAVAALKAGAFDYLAKPVGLE
QLRALVKSALRLPDGGSESVDPLQSLIGDSPSMQQVRAMIEKLARSQAPIYISGESGSGK
ELAARLIHTRSARSAGPFVPVNCGAIPENLMESEFFGYRKGAFTGADSDREGFFQAANGG
TLFLDEVADLPLAMQVKLLRAIQEKRVRKVGCVAEEAVDVRIICATHRNLRDCVDKGSFR
QDLYYRLNVIELRMPPLRERVEDIAPLVDSILRRLCGEVHPHLSAGALKALELYSFPGNV
RELENILERATALSSSDGIEGEDLHLDPEEAAGEAVGRGSETLDDYLNRLERQAILEALQ
KTEGNRTAAARLLGVTFRSMRYRLERLGID
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgttgccagaaccgaacgacgtccgcgcggcgaactgacgcggattcttgtcgtc
gatgacgaagctgatatccgcgaactgatcgacctgacgctggctcgcatggggctggcc
gccgagtgcgtcggttcggtggccgaggcgcgggcggcgctgagcgccgggagctttcag
ctgtgcctgaccgacatgcgtctgccggacggcgaggggctggatatcgtccgccacatt
ggcgagcatcatgcccagacgccggtcgccgtgatcaccgccttcggcagcgccgaaaat
gcagtggccgcgctgaaggccggagcattcgactatctggccaaaccggttggcctcgag
cagttgcgcgccctggtcaaatcggcgctgcgcctgccggatggcgggtcggagagcgtc
gatcccttgcagtcgctgatcggcgattcgccgagcatgcagcaggtgcgggcgatgatc
gagaagctggcgcgcagccaggcgccgatctacatttccggcgaatcgggcagcggcaag
gaactggcggcccgcctgatccatacgcgcagcgcgcgcagcgccgggccgttcgttccg
gtgaactgcggcgcgattccggaaaacctgatggagagcgagttcttcggttaccggaaa
ggcgctttcaccggcgccgacagcgaccgcgaaggcttcttccaggcggccaacggcggc
acgctgtttctcgacgaagtggccgatctgccgctcgccatgcaggtcaaactgctccgc
gccattcaggaaaagcgtgtccgcaaggtcggctgcgttgccgaggaggcggtcgatgtg
cggatcatctgcgcgacgcaccgcaatttgcgcgactgcgtcgacaaaggcagtttccgc
caggatttgtattaccgcctgaatgtcatcgagttgcgcatgccgccgctgcgcgagcgg
gtcgaggatatcgcgccgctggtcgactcgatcctccgccgcctctgtggcgaggtgcat
ccgcatttgtcggccggagccttgaaggcgctcgagttgtactccttccccggcaatgtg
cgcgaactggaaaacatcctggagcgcgccaccgcgctcagttcgagcgacggcatcgag
ggcgaggatctccatctcgatccggaagaagcggccggcgaggcagtcgggcgcggcagc
gagacgctcgacgactacctgaatcgcctggagcgccaggccatcctcgaagccttgcag
aagaccgagggcaaccgcacggcggcggcccgcctgctcggggtgacgttccgctcgatg
cgctatcgcctggaacggctgggcatcgactga
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