Dechloromonas denitrificans: KI615_06560
Help
Entry
KI615_06560 CDS
T08301
Name
(GenBank) retention module-containing protein
Organism
dden
Dechloromonas denitrificans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_12
Laminin_G_3
Big_15
HemolysinCabind
Pentaxin
Laminin_G_2
Motif
Other DBs
NCBI-ProteinID:
UCV09183
LinkDB
All DBs
Position
1365899..1371106
Genome browser
AA seq
1735 aa
AA seq
DB search
MPQAQIVATVASISGAAFARDQDGKMRRLKAGDAIREGEAVVAADGGEVTLLLADGSQMI
VAPGETVSLDAEVVAQEKPDAFDSAVVNDQKGFEKIAKALTTGGDLDALLEDPAAGVAGP
GGNEGHTFVEFLRVVEAVDALAFQFGTPQSRTVETFDGGALVPTGGTVDVAGTTGTPGTP
GTPGTPSVVVNIVDPALNVADNVSTVTFTFSEVPFGFTAIDIVASGGTVSGLTATADPKV
FTATFTADPGYTGIGSVSVGAGSYSNALGNPGTAGSDTVGIDTAAPVASITLDPNITADD
IISAAEVGQTIAITGTVGGDVQVGDTVTLTINGTPYTGPVLAGHTFSIDVPGSALAADPD
RTIEASVTTTDAGGNSATGVDTEGYSVATGSPSVVVNIVDPALNVADNVSTVTFTFSEVP
FGFTAIDIVASGGTVSGLTATADPKVFTATFTADPGYTGIGSVSVGAGSYSNALGNPGTA
GSDTVGIDTAAPVASITLDPNITADDIISAAEVGQTIAITGTVGGDVQVGDTVTLTINGT
PYTGPVLAGHTFSIDVPGSALAADPDRTIEASVTTTDAGGNSATGVDTEGYSVATGSPSV
VVNIVDPALNVADNVSTVTFTFSEVPFGFTAIDIVASGGTVSGLTATADPKVFTATFTAD
PGYTGIGSVSVGAGSYSNALGNPGTAGSDTVGIDTAAPVASITLDPNITADDIISAAEAG
QTIAITGTVGGDVQVGDTVTLTINGTPYTGPVLAGHTFSIDVPGSALAADPDRTIEASVT
TTDAGGNSATGVDTEGYSVATGSPSVVVNIVDPALNVADNVSTVTFTFSEVPFGFTAIDI
VASGGTVSGLTATADPKVFTATFTADPGYTGIGSVSVGAGSYSNALGNPGTAGSDTVGID
TAAPVASITLDPNITADDIISAAEVGQTIAITGTVGGDVQVGDTVTLTINGTPYTGPVLA
GHTFSIDVPGSALAADPDRTIEASVTTTDAGGNSATGVDTEGYSVATGSPSVVVNIVDPA
LNVADNVSTVTFTFSEVPFGFTAIDIVASGGTVSGLTATADPKVFTATFTADPGYTGIGS
VSVGAGSYSNALGNPGTAGSDTVGIDTAAPVASITLDPNITADDIISAAEAGQTIAITGT
VGGDVQVGDTVTLTINGTPYTGPVLAGHTFSIDVPGSALAADPDRTIEASVTTTDAGGNS
ATGVDTEGYSVNTAGTAPTLSASWVDYWQFNEGAGASTTNYNPLVDQVATITDNNKAGLN
PAADLSPTWTTGRNGSTAIEFHGVGGASAQRDGGWLALAPSVTEALAGHTASQEAALSFW
IKTTQVGSGVGWNSPSVIGTENNGWIADIQWGSINAAGQIGLGMRDDVGVMSSTSINDGV
WHQVVVTHDFETGATRVFVDGVLEASRILNPGIIVPNNFLGLGVTADDGGAAHRFLNGTL
EDVRIYDQTLTASQIQAIYETELMGNQSNVIANDGQTIRFALDVHDAVSTVLSGLVSGTM
VSSGAHSALVDASGTVDISGWNATEVALSDYGSGSYMITVSATNATNGTVSKLLSVVNDS
DSVVGTAAADSLVGNANHNVLAGGDGNDVLSGLAGNDMLIGGTGDDRLIGGAGSDALTGG
LGSDTFAWSLADQGTVAIPARDTITDFSPAAQAAGGDVLDLRDLLPSATDAATLDNYLNF
SKSGLDTVIDVRPTGAAGGVTQQIVLSNVDLTASGTLNDVAIIQDLLTKGKLLTD
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagcccaaatcgttgccaccgtcgcttccatttccggtgcggcattcgcccgc
gaccaggacggcaagatgcggcgcctcaaggcgggggatgcgatacgcgaaggcgaagca
gtggtcgcggctgatggtggcgaagtaacgctattgctggccgatggcagccagatgatc
gtcgcgccgggcgaaacggtcagcctcgacgccgaagtcgtggcgcaggaaaaaccggat
gctttcgatagcgccgtggtcaacgatcaaaaaggcttcgagaaaattgccaaggcactg
accaccggcggcgatcttgatgccttgctggaagatccggcagccggagtggctggcccc
ggcggcaacgaaggtcacaccttcgtcgaattcctgcgcgtcgtcgaagcggtcgatgcg
ctggccttccagtttggcacgccgcagagccgtaccgtcgagactttcgatggtggcgca
ttggttccgacagggggaaccgttgatgtggccggtaccactggcacccctggcacccct
ggcacccctggaactccgagcgttgtggtgaacatcgtcgaccccgcgctcaatgttgcc
gacaacgtctccaccgtcaccttcaccttcagcgaagtgcccttcggcttcacggccatc
gacatcgtcgccagcggcggcacggtcagcggcctgaccgccacggccgacccgaaagtg
ttcaccgccaccttcaccgccgaccccggctacaccggcatcggcagcgtttcggtcggc
gccggcagctacagcaacgcgctcggcaacccgggcacggcaggtagcgacacggtcggc
atcgacaccgccgcgccggttgccagcatcacgctcgacccgaacatcacggccgacgac
atcatcagtgccgccgaagtcggccagaccatcgccatcaccggcacggtcggcggcgac
gtccaggtcggcgacaccgtcaccctgacgatcaacggcacgccgtacaccggcccggtc
ctggccggccacaccttcagcatcgacgtcccgggcagcgccctggccgccgatccggac
cgcaccatcgaggccagcgtgacgaccaccgatgccggcggcaacagcgccaccggcgtc
gacaccgaaggctacagcgtcgccaccggcagcccgagcgttgtggtgaacatcgtcgac
cccgcgctcaacgtcgccgacaacgtctccaccgtcaccttcaccttcagcgaagtgccc
ttcggcttcacggccatcgacatcgtcgccagcggcggcacggtcagcggcctgaccgcc
acggccgacccgaaagtgttcaccgccaccttcaccgccgaccccggctacaccggcatc
ggcagcgtttcggtcggcgccggcagctacagcaacgcgctcggcaacccgggcacggca
ggtagcgacacggtcggcatcgacaccgccgcgccggttgccagcatcacgctcgacccg
aacatcacggccgacgacatcatcagtgccgccgaagtcggccagaccatcgccatcacc
ggcacggtcggcggcgacgtccaggtcggcgacaccgtcaccctgacgatcaacggcacg
ccgtacaccggcccggtcctggccggccacaccttcagcatcgacgtcccgggcagcgcc
ctggccgccgatccggaccgcaccatcgaggccagcgtgacgaccaccgatgccggcggc
aacagcgccaccggcgtcgacaccgaaggctacagcgtcgccaccggcagcccgagcgtt
gtggtgaacatcgtcgaccccgcgctcaacgtcgccgacaacgtctccaccgtcaccttc
accttcagcgaagtgcccttcggcttcacggccatcgacatcgtcgccagcggcggcacg
gtcagcggcctgaccgccacggccgacccgaaagtgttcaccgccaccttcaccgccgac
cccggctacaccggcatcggcagcgtttcggtcggcgccggcagctacagcaacgcgctc
ggcaacccgggcacggcaggtagcgacacggtcggcatcgacaccgctgcgccggttgcc
agcatcacgctcgacccgaacatcacagccgacgacatcatcagtgccgccgaagccggc
cagaccatcgccatcaccggcacggtcggcggcgacgtccaggtcggcgacaccgtcacc
ctgacgatcaacggcacgccgtacaccggcccggtcctggccggccacaccttcagcatc
gacgtcccgggcagcgccctggccgctgatccggaccgcaccatcgaggccagcgtgacg
accaccgatgccggcggcaacagcgccaccggcgtcgacaccgaaggctacagcgtcgcc
accggcagcccgagcgttgtggtgaacatcgtcgaccccgcgctcaacgtcgccgacaac
gtctccaccgtcaccttcaccttcagcgaagtgcccttcggcttcacggccatcgacatc
gtcgccagcggcggcacggtcagcggcctgaccgccacggccgacccgaaagtgttcacc
gccaccttcaccgccgaccccggctacaccggcatcggcagcgtttcggtcggcgccggc
agctacagcaacgcgctcggcaacccgggcacggcaggtagcgacacggtcggcatcgac
accgccgcgccggttgccagcatcacgctcgacccgaacatcacggccgacgacatcatc
agtgccgccgaagtcggccagaccatcgccatcaccggcacggtcggcggcgacgtccag
gtcggcgacaccgtcaccctgacgatcaacggcacgccgtacaccggcccggtcctggcc
ggccacaccttcagcatcgacgtcccgggcagcgccctggccgccgatccggaccgcacc
atcgaggccagcgtgacgaccaccgatgccggcggcaacagcgccaccggcgtcgacacc
gaaggctacagcgtcgccaccggcagcccgagcgttgtggtgaacatcgtcgaccccgcg
ctcaacgtcgccgacaacgtctccaccgtcaccttcaccttcagcgaagtgcccttcggc
ttcacggccatcgacatcgtcgccagcggcggcacggtcagcggcctgaccgccacggcc
gacccgaaagtgttcaccgccaccttcaccgccgaccccggctacaccggcatcggcagc
gtttcggtcggcgccggcagctacagcaacgcgctcggcaacccgggcacggcaggtagc
gacacggtcggcatcgacaccgctgcgccggttgccagcatcacgctcgacccgaacatc
acagccgacgacatcatcagtgccgccgaagccggccagaccatcgccatcaccggcacg
gtcggcggcgacgtccaggtcggcgacaccgtcaccctgacgatcaacggcacgccgtac
accggcccggtcctggccggccacaccttcagcatcgacgtcccgggcagcgccctggcc
gctgatccggaccgcaccatcgaggccagcgtgacgaccaccgatgccggcggcaacagc
gccaccggcgtcgacaccgaaggctacagcgtcaacactgcggggacggcaccgaccctt
tccgccagttgggtggattactggcagttcaatgaaggggctggtgcgtctaccacgaac
tacaatccgctcgtcgatcaggttgcgacgattaccgacaacaacaaggcgggcttgaat
ccggcagccgatctttctcctacctggacgaccggacgaaatggctcgactgccatcgaa
tttcatggtgtgggtggggcttcggcacaacgggatggcggttggttggcgcttgccccg
agtgtgacggaagcgctggccgggcataccgcttctcaggaagccgcgttgtccttctgg
atcaagacgacacaggtcgggagtggtgtcggttggaattcgccgtcggtcatcggtacg
gagaacaatggctggattgccgacatccagtgggggtcaatcaatgcggccggccagatt
ggcctcggcatgcgggatgacgtcggggtgatgagtagcacgtcaatcaacgatggtgtg
tggcaccaggttgttgtcacgcatgattttgaaacaggtgctacgcgggtattcgtcgat
ggcgtactggaagccagtcgtatattgaatcccggcatcatcgtccccaacaacttcctc
ggactgggcgttactgcggatgacggcggggcggcgcaccgcttcctcaacggcactctg
gaagacgttcggatctacgaccagacgctgacggctagccagatccaggcgatctacgag
actgaattgatgggcaatcaaagcaacgtgattgccaatgacggtcagacgattcgtttc
gccctggacgtccatgatgcggtcagtactgttttgtccggtctggtgagtggcacgatg
gtttcttccggtgcccattccgctttggtcgatgcctccggcacggtcgatatttccgga
tggaatgccaccgaagtggcgctcagtgactacggcagcggctcttacatgattacggta
agcgccaccaatgccaccaacggcacggtcagcaagctgctgtccgtggtcaatgacagc
gactcagtcgtcggtacggcagcggcggatagtctggtcggcaacgccaatcacaatgtc
ctggccggtggcgacggtaacgatgtgctgtccgggttggctggcaatgacatgctgatc
ggcggcactggcgacgaccggctgatcggaggggctggcagcgatgcgctgaccggtggc
ctgggttctgatacctttgcttggtcgttggccgatcagggaacagtggccattccggcc
cgcgatacgatcaccgatttctctccggcggcgcaagcggctggcggcgacgtgcttgat
ctgcgcgatctgctgccgagtgcgaccgatgcggcgacgctcgacaactatctgaacttc
tccaaatcgggcctcgatacggtgattgatgtccgcccgaccggggcggccggtggcgtt
acccagcagatcgtgctgtccaacgtcgatctgacggcgagcggtacgctcaacgatgtg
gcgatcattcaggacctgctgaccaagggcaagctgctgaccgactga
DBGET
integrated database retrieval system
