Dechloromonas denitrificans: KI615_07130
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Entry
KI615_07130 CDS
T08301
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dden
Dechloromonas denitrificans
Pathway
dden03410
Base excision repair
dden03430
Mismatch repair
dden03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dden00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KI615_07130 (recJ)
03430 Mismatch repair
KI615_07130 (recJ)
03440 Homologous recombination
KI615_07130 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dden03400
]
KI615_07130 (recJ)
DNA repair and recombination proteins [BR:
dden03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KI615_07130 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KI615_07130 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KI615_07130 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UCV09291
LinkDB
All DBs
Position
complement(1503498..1505186)
Genome browser
AA seq
562 aa
AA seq
DB search
MTRIVNRSIPQRVVWQLEQQGLHPLLARLYAARGVKDKAELDYELKSLIPPSALTHATDA
AHMLADAIEAEARLLIIGDYDCDGATATAVGMRALKMLGADVDFLLPDRFKLGYGLSPEI
VDVAAQQSPDLIITVDNGIASIEGVNRAREHGIATLITDHHLPAETLPEADCIVNPNQPG
CDFPSKCIAGVGVMFYVMLALRAELRERGFFVERPEPNFASLLDLVALGTVADVVKLDRN
NRILVSQGLKRMRAGQLHAGLSALFKAAGRDPKKATAMDLGFILGPRLNAAGRLADMRLG
VECLLTDDPARALNIAQQLDALNRERREIESGMQEQARILLESLDANDSASGIALFDEGW
HEGVVGILASRIKDKLHRPVFAFAPGEGGIIKGSGRSIPGLHLRDALDLVAKRAPGLLVR
FGGHAMAAGATLRAENFEQFRELFAQVAGELLSPADLTRTLETDGALEGSYFSLETARLL
DNEIWGQGFPAPLFIDEFEVEQQRVLKEKHLKLRLRKGETRIDAIQFNFSNQPGNNTRVA
YRLAINEYMGVETTQLMVEHLE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgcatcgtcaaccgcagcattccgcaacgcgtcgtctggcaactggaacaacag
ggcctgcatccgctgctcgcccgcctctacgccgcgcgcggcgtcaaggacaaggccgaa
ctcgactacgaactgaaatcgctgatcccgccgagtgccctgacccacgccaccgatgcc
gcccacatgctggccgatgccatcgaggccgaagcccgtctgctgatcatcggcgattac
gactgcgacggcgccaccgccaccgcggtcggcatgcgcgccctgaaaatgctcggcgcc
gacgtcgatttcctgctccccgaccgcttcaagctgggctacggcctgtcgccggaaatc
gtcgatgtcgcggcgcaacagtcgcccgacctgatcatcaccgtcgacaacggcatcgcc
agcatcgaaggcgtgaaccgcgcccgcgaacacggcatcgcaacgctgatcaccgaccac
cacctgccggccgaaacgctgcccgaggccgattgcatcgtcaatccaaaccagcccggc
tgcgatttcccgtcgaaatgcatcgccggcgtcggcgtgatgttctacgtcatgctcgcc
ctgcgcgccgaactgcgcgaacgcggtttcttcgtcgagcggccggaacccaatttcgcc
agcctgctcgacctggtcgccctcggcaccgtcgccgacgtcgtcaagctcgaccgcaac
aaccgtatcctcgtcagccagggcctcaaacgcatgcgcgccggccaattgcacgccggc
ctgtcggcgctgttcaaggcggccggccgcgacccgaaaaaagccacggcgatggatctc
ggcttcatcctcgggccgcgcctgaatgccgccggccgactggccgacatgcgcctcggc
gtcgaatgcctgctcaccgacgatccggcccgcgccctcaacatcgcccaacagctcgac
gcgctgaaccgcgaacggcgcgaaatcgaatcgggcatgcaggaacaggcgcggatcctg
ctcgagtcgctcgatgccaacgacagcgcctcgggcatcgcgctgttcgacgaaggctgg
cacgaaggcgtcgtcggcatcctcgcctcgcgcatcaaggacaaactgcaccgcccggtg
tttgccttcgcccccggcgaaggcggcatcatcaagggttccggccgctcgattcccggc
ctgcacctgcgcgatgcgctcgatctggtcgccaagcgcgcccccggcctcctagtccgc
ttcggcggccacgccatggcggccggcgccacgctgcgcgccgaaaacttcgagcaattc
cgcgaactgttcgcccaggtggccggcgaactgctctcgccagccgacctgacccgcacg
ctggaaaccgatggcgccctggaaggcagctatttctcgctggaaaccgcccgcctgctg
gacaacgaaatctggggccagggctttccggcgccgctgttcatcgatgaattcgaggtc
gagcagcaacgcgtgctcaaggaaaaacacctcaagctgcgcctgcgcaagggcgagacg
cggatcgacgcgatccagttcaacttcagcaaccagccgggaaacaatacccgggtcgct
taccggctcgccatcaatgaatatatgggtgtcgaaacgacccagttgatggtcgagcat
ctggaatag
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