Dechloromonas denitrificans: KI615_07225
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Entry
KI615_07225 CDS
T08301
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
dden
Dechloromonas denitrificans
Brite
KEGG Orthology (KO) [BR:
dden00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dden03016
]
KI615_07225 (trmA)
Enzymes [BR:
dden01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
KI615_07225 (trmA)
Transfer RNA biogenesis [BR:
dden03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
KI615_07225 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_12
Methyltransf_4
Methyltransf_15
MTS
Methyltransf_11
Methyltransf_31
DREV
PrmA
NodS
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
UCV09310
LinkDB
All DBs
Position
complement(1524147..1525238)
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AA seq
363 aa
AA seq
DB search
MPLQNIVPAEYDSQLAEKVAQFKQAFAPFGVAELTIAASTPLHYRLRAEFRMFHDKGRVD
YAMFAPADRKVPVVIETFPVAAESICELMPRLRDRLQASNTLKDGLFQVDFLATLSGEML
VTLIYHRPLAQRWEAAAQGLAADLKVQIIGRSRKQKVVLERDWVIEQFELNGRQLSYQQI
EASFTQPNGQVNRQMLAWACQQATGLGGDLLELYCGNGNFTVALAPLFARVLATEVSTSS
VKAAQYNMAANQLANVAVVRLASEDISAALAGSKVLKELQGIELSDYRFSTLFVDPPRAG
LDAQTLELASRFDNILYISCNPQSLQDNVSALQATHEIAAAAVFDQFPYTHHLESGLLLK
RRP
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgccgctacagaatatcgttcctgccgagtacgactcgcaactggccgagaaggtcgcc
cagttcaaacaggctttcgcccccttcggtgttgccgaactcaccattgccgcctcgaca
ccgctgcattaccgcctgcgcgccgagttccggatgttccacgacaagggacgggtcgat
tacgcgatgttcgccccggccgaccggaaggtgccggtagtcatcgagactttcccggtc
gccgccgaatcgatctgcgaactgatgccgcgcctgcgcgaccgcctgcaagccagcaac
accttgaaggatggtcttttccaggtcgatttcctggctacgttgagcggcgaaatgctc
gtcacgctgatttatcaccgtccgctcgcccagcgctgggaggccgccgcccagggactg
gccgccgatctcaaggtgcagattatcgggcggagcagaaagcagaaggtcgtgctcgag
cgcgattgggtcatcgaacaattcgagctgaatggccgccagctcagctaccagcaaatc
gaggccagtttcacccagcccaacggccaggtgaaccgccagatgctggcctgggcctgc
cagcaggcgaccggcctcggtggtgacctgcttgaactgtactgcggcaacggcaatttc
accgtggcgctggcgccgctgttcgcgcgcgtcctcgccaccgaagtcagcacctcctcg
gtcaaggcggcgcagtacaacatggcagccaatcagctcgccaatgtggcggtggtccgc
ctggccagcgaagacatcagcgccgcactggccggcagcaaggttctcaaggaactgcag
ggcatcgagctgagcgactaccgcttttcaaccctgttcgtcgatccgccgcgcgccggg
ctcgacgcgcaaaccctcgaactggccagccgcttcgacaatatcctgtatatctcgtgc
aatccgcaatcgctgcaggacaacgtcagcgcgctgcaggccacgcacgaaatcgcggct
gccgcggtgttcgaccagttcccctacacccatcatctggagagcgggctgctgctcaaa
cggcggccctga
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