Dechloromonas denitrificans: KI615_08815
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Entry
KI615_08815 CDS
T08301
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dden
Dechloromonas denitrificans
Brite
KEGG Orthology (KO) [BR:
dden00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dden03009
]
KI615_08815 (rimO)
Enzymes [BR:
dden01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KI615_08815 (rimO)
Ribosome biogenesis [BR:
dden03009
]
Prokaryotic type
ribosomal protein modification factors
KI615_08815 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
UCV09595
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Position
1838830..1840152
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AA seq
440 aa
AA seq
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MNTIEKVPTVGFVSLGCPKAGSDAERILTKLRAEGYEISPSYENSDLVIVNTCGFIDAAV
EESLDAIGEALNENGKVIVTGCLGAKGDIVKTTHPSVLAVTGPHAADEVMGYVHQHLPKL
HDPYSDLVPPQGVRLTPDHFAYLKISEGCNHSCTFCIIPSLRGPLVSRPVGDVLAEAENL
ARAGVKEILVISQDTSAYGVDLKYRTAFWGGKPVKSRLKELCEALASFGIWVRLHYVYPY
PSVDDVIPLMAEGKILPYLDVPFQHASPKILKAMKRPASAENTLERIAKWRSICPEIVIR
STFITGFPGETEEDFDQLIQFLEDAKLDRVGAFAYSPVDGAKANELEGLPPEEVREDRRR
WLMQVQEDISAAKLEAKIDTVIEVLVDAVDEEGVVARSKADAPEIDGLVYIDGFFDAEPG
DFLQVRVTDADHHDLYAEPV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaataccattgaaaaagtgccgactgtcggcttcgtcagcctgggttgcccgaaagcc
ggcagcgacgccgagcgtatcctgaccaagctgcgcgccgaaggctacgaaatctccccg
agctacgagaattccgacctcgtcatcgtcaatacctgcggcttcatcgatgccgccgtc
gaggaatcgctcgacgccatcggcgaggcgctcaacgaaaacggcaaggtcatcgtcacc
ggctgcctgggcgccaagggcgatatcgtcaagacgacgcacccgtcggtgctcgccgtc
accggcccgcatgccgccgacgaggtgatgggctatgtccatcagcacctgcccaagctg
cacgatccgtacagcgatctggtgccgccgcagggcgtccgcctgacgccggaccacttt
gcctacctgaagatttccgaaggctgcaaccacagctgcaccttctgcatcatcccgtcg
ctgcgcggcccgctggtctcgcggccggtcggcgacgtgctggccgaagcggaaaacctg
gcgcgcgccggggtcaaggaaatcctggtcatttcgcaggacacctcggcctacggcgtc
gatctgaaataccgcaccgccttctggggcggcaagccggtcaaatcgcgcctgaaggaa
ctgtgcgaggcgctggccagcttcggcatctgggtccgtttgcactacgtctatccgtat
ccgtcggtcgacgacgtgattccgctgatggccgaaggcaagatcctgccttacctcgac
gtgccgttccagcacgccagcccgaagattctcaaggcgatgaagcgtccggcctcggcc
gagaacacgctggaacgcatcgccaagtggcgctcgatctgcccggaaatcgtcatccgt
tcgaccttcattaccggcttccccggcgaaaccgaagaggatttcgaccaattgatccag
ttcctcgaagacgccaagctcgatcgcgtcggcgccttcgcctactcgccggtcgacggt
gccaaggccaatgagctcgaaggcctgccgccggaagaggtgcgcgaagaccgccggcgc
tggctgatgcaggtccaggaagatatcagcgcggccaagctggaagccaagatcgatacg
gtcatcgaagtgctggtcgatgcggtcgatgaagaaggcgtcgtcgcccgttccaaggcc
gatgccccggaaatcgacggtctggtctatatcgacggcttcttcgacgccgaaccgggc
gacttcctgcaggtgcgcgtcaccgatgccgatcaccatgacctctacgccgagcctgtc
tga
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