Dechloromonas denitrificans: KI615_09705
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Entry
KI615_09705 CDS
T08301
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dden
Dechloromonas denitrificans
Pathway
dden03030
DNA replication
dden03430
Mismatch repair
dden03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dden00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KI615_09705
03430 Mismatch repair
KI615_09705
03440 Homologous recombination
KI615_09705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dden03032
]
KI615_09705
03400 DNA repair and recombination proteins [BR:
dden03400
]
KI615_09705
Enzymes [BR:
dden01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KI615_09705
DNA replication proteins [BR:
dden03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KI615_09705
DNA repair and recombination proteins [BR:
dden03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KI615_09705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
COLFI
PAS_9
Motif
Other DBs
NCBI-ProteinID:
UCV09759
LinkDB
All DBs
Position
2024508..2026670
Genome browser
AA seq
720 aa
AA seq
DB search
MKAKYRFILAVVVLGLLMTGPFVVSSLLVWLDMKEAERNLLVELLVSRLPVGTMMTMCGF
AIGVLVLHKLFKQYVEGLLRMSETLRLMLGANRDFRVTLDGPPEVQQLAMAANDLAQQRD
VLMNDVDAQIGRAKASVEEEKNRLAALMSELAQAVVVCNLDGRILLYNNRARLQFKALAL
GPTSVSGGALIGLGRSIFSILEKNQVEHAQEVIRQRLGAGKTAISNFITTTRGGQLLRVQ
MVPVLAAASGEGEAAMSGYVLTVENITRSIELEARRDQVLHSLTEGSRSALGNIRAAVAN
LIDYPEMEPELRERFVKVVDDEAARMSQRLDQTMIEFSDSMKTRWPLEDILGIDIIAAAQ
RRINEKLNLPTKTEELDDALWVKADSFSLVFSLVFLAAKLQDHYEPRELRFRLKSEGKLA
YLDLIWAGPAMSSETFYTWEMDSMQVGSETTPLSIRDVIDRHGGEIWYQREKAAHRAFFR
FVLPVATPEIQQDQEDRKRGSSRPEYYDFDLFNFADKSIDLERKLSDLTCTVFDTETTGL
EPSNGDEIIQIGAARIVNNRLLRQEVFDQIIDPECPLKPESIPIHGITEDMVRGKPTIDV
ILPAFHEFCEDTVLIAHNAAFDMRFLQLKEERTGIRFSQPVLDTLLLSAVVHPNQESHKL
DVILERLGIHIASRHNALEDALATGEVFLKLVPLLEEKGIVTVRQALEASEKTYFARVKY
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctaaatatcgcttcatccttgccgtggtcgtgctcggtctgttgatgaccggg
ccattcgttgtcagttcgctgctcgtctggctggacatgaaggaagccgagcggaacctg
ctggtcgaattgctcgtgtcgcgcctgccggtcggcacgatgatgacgatgtgcggtttt
gcaattggcgtgctggtgctgcacaagctgttcaagcaatatgtcgagggcctgttgcgg
atgtccgaaacgctgcgcctgatgctcggcgccaaccgcgattttcgcgtgacgctcgat
gggccgccggaggtgcagcaactggcgatggccgccaacgatctggcgcagcagcgtgac
gtgctgatgaacgatgtcgatgcccagatcggtcgggccaaagcctcggtcgaggaagag
aagaatcggctcgccgccttgatgtccgaactggcgcaagccgtcgtggtctgcaatctc
gacggtcgcatcctgctctacaacaaccgcgcccgccttcagttcaaggcgctggcgctg
gggccgacctcggtgagcggcggggcgttgatcggtctcggccggtcgatcttctcgatt
ctcgaaaaaaatcaggtcgagcacgcccaggaagtcattcgccagcgtttgggcgccggc
aagacggccatttccaatttcatcacgacgacccgcggcggccagttgctgcgcgtccag
atggttccggtactggcggcagcgagcggggagggcgaagcggcgatgtccggctacgtg
ctgactgtcgagaacatcacgcgcagcatcgagctggaggcgcgtcgcgatcaggtgctg
cattcgctgaccgaaggcagccgttcggccctgggcaatatccgcgccgccgtcgccaac
ctgatcgactatcccgaaatggagccggagttgcgcgagcgtttcgtcaaggtggtcgat
gacgaagccgcccggatgagtcagcgactggaccagaccatgatcgagttttccgattcg
atgaagacccgctggccgctcgaggacattctcggcatcgacatcatcgccgccgcccag
cgccggatcaacgaaaagctcaatctgccgacaaagaccgaggagctggacgatgccttg
tgggtcaaggccgacagtttctcgctggtcttttccctggtctttctcgccgccaaattg
caggatcactacgagccgcgcgaactgcgtttccgtctcaaatcggaaggcaagctggct
tacctcgatctgatctgggccggtccggccatgtcctcggagacgttctacacctgggaa
atggattcgatgcaggtcggcagcgaaacgacaccgctctccatccgcgatgtcatcgac
cggcacggcggggaaatctggtaccagcgcgaaaaggcggcgcaccgcgccttcttccgt
ttcgtgctgccggtggcgacgccggaaatccagcaggaccaggaggatcgcaagcgcggt
tcgagccggccggagtattacgatttcgatctgttcaattttgccgacaagtcgatcgat
ctcgagcgcaagctctccgacctgacctgtacggttttcgataccgaaaccaccgggctg
gagccttccaacggcgacgagatcatccagatcggcgccgcccggattgtgaacaaccgc
ctgttgcgtcaggaagttttcgaccagatcatcgatccggaatgcccgcttaagcccgaa
tcgatcccgattcacggcatcaccgaagacatggtgcgcggcaaaccgaccatcgacgtg
atcctgccggccttccacgagttttgcgaagacaccgtgctgattgcccataacgcggct
ttcgacatgcgcttcctgcaattgaaggaggagcggactggtatccgcttctcgcagccg
gtactcgatacgttgctgctctcggcggtggtgcatccgaatcaggaatcgcacaagctc
gacgtgatcctggagcgcctcggcatccatatcgccagtcggcacaatgcgctggaagat
gcactggcgaccggcgaggtcttcctgaaactggtgccgctgcttgaggaaaagggcatc
gtcacggtgcgccaggccctggaagcgtcggagaagacctattttgcccgggtcaagtac
tga
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