Dechloromonas denitrificans: KI615_10315
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Entry
KI615_10315 CDS
T08301
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dden
Dechloromonas denitrificans
Pathway
dden03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dden00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KI615_10315 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dden03019
]
KI615_10315 (pnp)
03016 Transfer RNA biogenesis [BR:
dden03016
]
KI615_10315 (pnp)
Enzymes [BR:
dden01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KI615_10315 (pnp)
Messenger RNA biogenesis [BR:
dden03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KI615_10315 (pnp)
Transfer RNA biogenesis [BR:
dden03016
]
Prokaryotic type
tRNA degradation factors
KI615_10315 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
S1_RRP5
KH_2
KH-I_KHDC4-BBP
S1_2
PCB_OB
Csa1
Terminase_6C
Motif
Other DBs
NCBI-ProteinID:
UCV09873
LinkDB
All DBs
Position
2166827..2168971
Genome browser
AA seq
714 aa
AA seq
DB search
MFNVVKKTFAYGDHQVTIETGEIARQAGGAVLVSMEETVVLVTVVAAKSAKPGQDFFPLT
VDYQEKVYAAGRIPGGFFKREGRPSEKETLTCRLIDRPIRPLFPDGFYNEVQVIATVMSL
NPEVDSDIPALLGASAALAISGVPFNGPIGAARVGYINGQYVLCPTLSQLKTSQLDLVVA
GTEAAVLMVESEADQLSEEIMLGAVVFGHTEMQKAINAINELVEEAGKPEWEWQAAPTDE
ALVANLSALVAAKLEEAYNITVKQTRSQAVKVIRAEAVAALCTGAEGAPDENTVGNLFHE
IEASIVRGRILSGAPRIDGRDTRTVRPITMRSGVLPRTHGSALFTRGETQALAVATLGTN
RDEQIIDALAGEYRDRFMMHYNMPPYATGECGRVGTPKRREIGHGRLAKRALLAVLPKPE
DFSYSMRLVSEITESNGSSSMASVCGGCLALLDAGVPLKAHVAGIAMGLIKDGNRFAVLT
DILGDEDHLGDMDFKVAGTTAGITALQMDIKIQGITKEIMQVALAQAQEARLHILGLMQE
SAAGPREEMSAYAPRLYTFKINPEKIRDVIGKGGAVIRALTEETGTTIDIQDDGTITIAA
TSGEAAAAARSRIDAITAEVEIGKIYEGTVLKILDFGAIVSVLPGKDGLLHISQIAQERV
AKVEDYLKEGQVVRVKVLETDDRGRVKLSMKAVAAEEGSSQPAVAPDAAQQQQQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgtcgtgaaaaaaaccttcgcctatggcgaccatcaggtcaccatcgaaaca
ggcgaaatcgcccgccaggccggcggcgccgtgttggtgtcgatggaagagactgtcgtt
ctggtaaccgttgtggccgccaagagtgccaagccgggtcaggatttcttcccgttgacc
gttgattatcaggaaaaagtttacgctgccggccgtattcccggtggcttcttcaagcgc
gaaggccgtccttccgaaaaggaaacgctgacctgccgtctgatcgaccgcccgatccgc
ccgctgttcccggacggtttctacaatgaggttcaagtcatcgccaccgtgatgtcgctg
aacccggaagtcgattccgatattccggctctgctcggtgcgtctgctgccctggcgatt
tccggcgtgccgttcaatggcccgatcggcgctgcccgcgtcggttatatcaatggccag
tacgtcctgtgtccgaccctgagccagctcaagaccagccagctcgacctcgtcgtcgcc
ggtaccgaagccgccgtgctgatggtcgagtccgaagccgatcagctgtccgaagagatc
atgctcggcgccgttgttttcggtcataccgaaatgcagaaggcgatcaacgccatcaac
gaactggttgaagaagccggcaagccggaatgggaatggcaagctgctccgacggatgaa
gcgctggttgccaacctgtctgccctggtcgctgccaagctcgaagaggcctacaacatc
accgtcaagcaaacgcgcagccaggccgtcaaggtcatccgtgccgaggctgtggcggcc
ctgtgtaccggtgctgaaggcgctccggatgaaaacaccgtcggcaacctgttccacgaa
atcgaagcttccatcgttcggggtcgcatcctttccggcgcaccgcgcatcgatggtcgc
gacacccgtaccgtgcgtccgatcaccatgcgttccggcgtcctgccgcgcacccatggt
tccgcgctgtttacccgtggcgaaacccaggctctggctgtcgccaccctcggcaccaat
cgcgacgaacagatcatcgacgcgctggctggcgagtaccgcgatcgtttcatgatgcac
tacaacatgcccccgtacgccaccggcgaatgtggccgtgtcggtacgccgaagcgtcgc
gaaatcggccatggccgtctggccaagcgcgccctgctggccgtgctgccgaagccggag
gatttctcctactcgatgcgcctggtctcggaaatcaccgagtccaacggttcctcgtcg
atggcttctgtctgcggcggctgtctggcgctgctcgatgccggcgtgccgctcaaggca
cacgttgccggtatcgccatgggcctgatcaaggacggtaaccgtttcgccgtgctgacc
gatatcctgggtgacgaagatcacctcggtgacatggacttcaaggtggctggcacgacc
gctggcatcaccgcgctacagatggacatcaagatccagggtatcaccaaggaaatcatg
caggtcgccctggcgcaagcccaggaagcccgtttgcacatcctcggcctgatgcaggaa
tccgctgccggtccgcgtgaggaaatgtcggcctacgcgccgcgtctctacaccttcaag
atcaatccggaaaagatccgtgacgtgatcggcaagggcggcgccgtcattcgtgcgctg
accgaagaaaccggtacgaccatcgatatccaggacgacggcacgatcaccatcgctgca
accagcggcgaagctgccgctgctgcccgttcgcgcatcgatgcgatcacggcggaagtc
gagatcggcaagatctacgaaggcaccgtgctgaagattcttgatttcggcgcaatcgtt
tccgtgctgccgggcaaggatggtctgctgcacatctcccagatcgcccaggagcgcgtt
gccaaggtcgaggactacctcaaggaaggccaggttgttcgcgtcaaggttctcgagacg
gacgaccgtggtcgcgtcaaactgtcgatgaaggcggttgccgctgaagaaggttctagc
cagccggcggttgcgccggacgcggctcagcagcaacagcagtaa
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